Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Gm5320-201ENSMUST00000207163 1519 ntBASIC14□□□□□ -0.17
Sp140Q6NSQ5 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sp140Q6NSQ5 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Gm17837-201ENSMUST00000186435 985 ntBASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sp140Q6NSQ5 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms