Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
VclQ64727 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.56□□□□□ -0.24
VclQ64727 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VclQ64727 Gm3222-201ENSMUST00000071282 990 ntBASIC13.56□□□□□ -0.24
VclQ64727 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
VclQ64727 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
VclQ64727 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VclQ64727 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
VclQ64727 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
VclQ64727 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.56□□□□□ -0.24
VclQ64727 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
VclQ64727 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VclQ64727 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
VclQ64727 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
VclQ64727 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VclQ64727 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VclQ64727 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VclQ64727 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
VclQ64727 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
VclQ64727 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
VclQ64727 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.55□□□□□ -0.24
VclQ64727 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
VclQ64727 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Mir698-201ENSMUST00000102164 109 ntBASIC13.55□□□□□ -0.24
VclQ64727 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Gm12859-201ENSMUST00000117834 427 ntBASIC13.55□□□□□ -0.24
VclQ64727 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
VclQ64727 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.55□□□□□ -0.24
VclQ64727 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
VclQ64727 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
VclQ64727 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
VclQ64727 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
VclQ64727 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
VclQ64727 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
VclQ64727 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.55□□□□□ -0.24
VclQ64727 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VclQ64727 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VclQ64727 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VclQ64727 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
VclQ64727 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VclQ64727 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
VclQ64727 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
VclQ64727 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.54□□□□□ -0.24
VclQ64727 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
VclQ64727 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VclQ64727 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
VclQ64727 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.54□□□□□ -0.24
VclQ64727 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
VclQ64727 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VclQ64727 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VclQ64727 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VclQ64727 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VclQ64727 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
VclQ64727 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.54□□□□□ -0.24
VclQ64727 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VclQ64727 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
VclQ64727 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VclQ64727 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VclQ64727 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VclQ64727 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VclQ64727 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
VclQ64727 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.54□□□□□ -0.24
VclQ64727 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.54□□□□□ -0.24
VclQ64727 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VclQ64727 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VclQ64727 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
VclQ64727 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VclQ64727 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
VclQ64727 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.53□□□□□ -0.24
VclQ64727 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
VclQ64727 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.53□□□□□ -0.24
VclQ64727 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
VclQ64727 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms