Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim27Q62158 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim27Q62158 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.9■□□□□ 0.3
Trim27Q62158 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim27Q62158 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim27Q62158 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim27Q62158 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim27Q62158 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.9■□□□□ 0.3
Trim27Q62158 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim27Q62158 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.9■□□□□ 0.3
Trim27Q62158 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.9■□□□□ 0.3
Trim27Q62158 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim27Q62158 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim27Q62158 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim27Q62158 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim27Q62158 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim27Q62158 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim27Q62158 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim27Q62158 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trim27Q62158 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim27Q62158 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim27Q62158 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim27Q62158 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim27Q62158 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Trim27Q62158 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim27Q62158 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim27Q62158 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim27Q62158 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.89■□□□□ 0.29
Trim27Q62158 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim27Q62158 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim27Q62158 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim27Q62158 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Trim27Q62158 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Trim27Q62158 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.89■□□□□ 0.29
Trim27Q62158 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim27Q62158 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.89■□□□□ 0.29
Trim27Q62158 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim27Q62158 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim27Q62158 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.89■□□□□ 0.29
Trim27Q62158 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim27Q62158 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim27Q62158 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Trim27Q62158 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
Trim27Q62158 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim27Q62158 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim27Q62158 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim27Q62158 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim27Q62158 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim27Q62158 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trim27Q62158 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim27Q62158 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Trim27Q62158 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim27Q62158 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim27Q62158 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.88■□□□□ 0.29
Trim27Q62158 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim27Q62158 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim27Q62158 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.88■□□□□ 0.29
Trim27Q62158 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.88■□□□□ 0.29
Trim27Q62158 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.88■□□□□ 0.29
Trim27Q62158 Gm9797-201ENSMUST00000052902 613 ntBASIC16.88■□□□□ 0.29
Trim27Q62158 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Grk6-205ENSMUST00000224653 2976 ntBASIC16.88■□□□□ 0.29
Trim27Q62158 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim27Q62158 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim27Q62158 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim27Q62158 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim27Q62158 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trim27Q62158 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim27Q62158 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim27Q62158 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim27Q62158 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim27Q62158 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim27Q62158 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim27Q62158 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim27Q62158 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim27Q62158 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.87■□□□□ 0.29
Trim27Q62158 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms