Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.63□□□□□ -0.39
VcanQ62059 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
VcanQ62059 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.63□□□□□ -0.39
VcanQ62059 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.63□□□□□ -0.39
VcanQ62059 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
VcanQ62059 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
VcanQ62059 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.63□□□□□ -0.39
VcanQ62059 Gm26315-201ENSMUST00000083890 321 ntBASIC12.63□□□□□ -0.39
VcanQ62059 Gm24447-201ENSMUST00000083977 338 ntBASIC12.63□□□□□ -0.39
VcanQ62059 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.63□□□□□ -0.39
VcanQ62059 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.63□□□□□ -0.39
VcanQ62059 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
VcanQ62059 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.63□□□□□ -0.39
VcanQ62059 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.63□□□□□ -0.39
VcanQ62059 Gm37042-201ENSMUST00000193816 581 ntBASIC12.63□□□□□ -0.39
VcanQ62059 Gm9555-201ENSMUST00000200908 583 ntBASIC12.63□□□□□ -0.39
VcanQ62059 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.63□□□□□ -0.39
VcanQ62059 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.63□□□□□ -0.39
VcanQ62059 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.63□□□□□ -0.39
VcanQ62059 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
VcanQ62059 Gm10179-201ENSMUST00000086233 688 ntBASIC12.63□□□□□ -0.39
VcanQ62059 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VcanQ62059 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
VcanQ62059 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VcanQ62059 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VcanQ62059 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VcanQ62059 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.62□□□□□ -0.39
VcanQ62059 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VcanQ62059 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.62□□□□□ -0.39
VcanQ62059 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.62□□□□□ -0.39
VcanQ62059 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VcanQ62059 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VcanQ62059 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VcanQ62059 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VcanQ62059 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VcanQ62059 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
VcanQ62059 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VcanQ62059 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
VcanQ62059 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
VcanQ62059 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VcanQ62059 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VcanQ62059 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
VcanQ62059 Gm12363-201ENSMUST00000122250 668 ntBASIC12.62□□□□□ -0.39
VcanQ62059 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VcanQ62059 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VcanQ62059 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VcanQ62059 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VcanQ62059 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VcanQ62059 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.61□□□□□ -0.39
VcanQ62059 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.61□□□□□ -0.39
VcanQ62059 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.61□□□□□ -0.39
VcanQ62059 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.61□□□□□ -0.39
VcanQ62059 Gm43916-201ENSMUST00000205062 967 ntBASIC12.61□□□□□ -0.39
VcanQ62059 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
VcanQ62059 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
VcanQ62059 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.61□□□□□ -0.39
VcanQ62059 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
VcanQ62059 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.61□□□□□ -0.39
VcanQ62059 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.61□□□□□ -0.39
VcanQ62059 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
VcanQ62059 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.61□□□□□ -0.39
VcanQ62059 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms