Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf20Q5DTM8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rnf20Q5DTM8 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Gm6912-201ENSMUST00000117218 544 ntBASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Gm24420-201ENSMUST00000176676 59 ntBASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Gm44872-201ENSMUST00000207864 420 ntBASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Rnf20Q5DTM8 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms