Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim80Q3V061 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim80Q3V061 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim80Q3V061 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim80Q3V061 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trim80Q3V061 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trim80Q3V061 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim80Q3V061 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Gm14042-201ENSMUST00000120139 833 ntBASIC14.26□□□□□ -0.13
Trim80Q3V061 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.26□□□□□ -0.13
Trim80Q3V061 Gm25948-201ENSMUST00000175334 112 ntBASIC14.26□□□□□ -0.13
Trim80Q3V061 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim80Q3V061 Gm43125-201ENSMUST00000201724 730 ntBASIC14.26□□□□□ -0.13
Trim80Q3V061 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.26□□□□□ -0.13
Trim80Q3V061 Gm18246-201ENSMUST00000221023 728 ntBASIC14.26□□□□□ -0.13
Trim80Q3V061 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim80Q3V061 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim80Q3V061 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim80Q3V061 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.25□□□□□ -0.13
Trim80Q3V061 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Trim80Q3V061 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.25□□□□□ -0.13
Trim80Q3V061 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim80Q3V061 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim80Q3V061 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Trim80Q3V061 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim80Q3V061 Gm8584-201ENSMUST00000171982 758 ntBASIC14.25□□□□□ -0.13
Trim80Q3V061 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim80Q3V061 Gm2272-201ENSMUST00000194903 582 ntBASIC14.25□□□□□ -0.13
Trim80Q3V061 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim80Q3V061 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim80Q3V061 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim80Q3V061 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim80Q3V061 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim80Q3V061 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Trim80Q3V061 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim80Q3V061 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.24□□□□□ -0.13
Trim80Q3V061 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim80Q3V061 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Trim80Q3V061 Mir449b-201ENSMUST00000104833 80 ntBASIC14.24□□□□□ -0.13
Trim80Q3V061 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim80Q3V061 Rpph1-201ENSMUST00000175096 319 ntBASIC14.24□□□□□ -0.13
Trim80Q3V061 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.24□□□□□ -0.13
Trim80Q3V061 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim80Q3V061 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim80Q3V061 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.24□□□□□ -0.13
Trim80Q3V061 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim80Q3V061 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim80Q3V061 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim80Q3V061 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim80Q3V061 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim80Q3V061 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim80Q3V061 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim80Q3V061 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim80Q3V061 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim80Q3V061 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim80Q3V061 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim80Q3V061 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim80Q3V061 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms