Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Otx2os1-206ENSMUST00000228153 787 ntBASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smim6Q3U0I6 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC10.66□□□□□ -0.7
Smim6Q3U0I6 AA414768-201ENSMUST00000121924 1257 ntBASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smim6Q3U0I6 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smim6Q3U0I6 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.65□□□□□ -0.7
Smim6Q3U0I6 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smim6Q3U0I6 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smim6Q3U0I6 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smim6Q3U0I6 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smim6Q3U0I6 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smim6Q3U0I6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Smim6Q3U0I6 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smim6Q3U0I6 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smim6Q3U0I6 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smim6Q3U0I6 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smim6Q3U0I6 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Smim6Q3U0I6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Smim6Q3U0I6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smim6Q3U0I6 Gm15678-201ENSMUST00000117573 960 ntBASIC10.65□□□□□ -0.7
Smim6Q3U0I6 Gm13418-201ENSMUST00000119097 944 ntBASIC10.65□□□□□ -0.7
Smim6Q3U0I6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms