Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43aQ3TL54 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43aQ3TL54 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43aQ3TL54 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trim43aQ3TL54 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trim43aQ3TL54 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43aQ3TL54 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43aQ3TL54 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43aQ3TL54 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43aQ3TL54 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43aQ3TL54 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.63□□□□□ -0.07
Trim43aQ3TL54 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43aQ3TL54 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.63□□□□□ -0.07
Trim43aQ3TL54 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 BC001981-202ENSMUST00000191393 1545 ntBASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Rubie-203ENSMUST00000227803 2430 ntBASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Gm20553-201ENSMUST00000204205 844 ntBASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.62□□□□□ -0.07
Trim43aQ3TL54 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43aQ3TL54 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Gm29741-201ENSMUST00000192667 421 ntBASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43aQ3TL54 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim43aQ3TL54 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim43aQ3TL54 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.6□□□□□ -0.07
Trim43aQ3TL54 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim43aQ3TL54 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trim43aQ3TL54 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim43aQ3TL54 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trim43aQ3TL54 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
Trim43aQ3TL54 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim43aQ3TL54 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trim43aQ3TL54 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trim43aQ3TL54 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim43aQ3TL54 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim43aQ3TL54 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Trim43aQ3TL54 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.6□□□□□ -0.07
Trim43aQ3TL54 Gm18737-201ENSMUST00000173594 937 ntBASIC14.6□□□□□ -0.07
Trim43aQ3TL54 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.6□□□□□ -0.07
Trim43aQ3TL54 Gm44719-201ENSMUST00000206404 149 ntBASIC14.6□□□□□ -0.07
Trim43aQ3TL54 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.6□□□□□ -0.07
Trim43aQ3TL54 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.6□□□□□ -0.07
Trim43aQ3TL54 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms