Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.54□□□□□ -0.24
Sox4Q06831 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Sox4Q06831 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.54□□□□□ -0.24
Sox4Q06831 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.54□□□□□ -0.24
Sox4Q06831 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.54□□□□□ -0.24
Sox4Q06831 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.54□□□□□ -0.24
Sox4Q06831 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.54□□□□□ -0.24
Sox4Q06831 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sox4Q06831 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sox4Q06831 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sox4Q06831 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sox4Q06831 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.54□□□□□ -0.24
Sox4Q06831 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox4Q06831 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Sox4Q06831 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sox4Q06831 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.53□□□□□ -0.24
Sox4Q06831 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.53□□□□□ -0.24
Sox4Q06831 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.53□□□□□ -0.24
Sox4Q06831 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 Gm18624-201ENSMUST00000220966 658 ntBASIC13.53□□□□□ -0.24
Sox4Q06831 Gm19220-201ENSMUST00000222682 803 ntBASIC13.53□□□□□ -0.24
Sox4Q06831 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.53□□□□□ -0.24
Sox4Q06831 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.53□□□□□ -0.24
Sox4Q06831 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sox4Q06831 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox4Q06831 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox4Q06831 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox4Q06831 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox4Q06831 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox4Q06831 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox4Q06831 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sox4Q06831 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Sox4Q06831 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox4Q06831 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox4Q06831 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox4Q06831 Gm14928-201ENSMUST00000120198 477 ntBASIC13.52□□□□□ -0.25
Sox4Q06831 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox4Q06831 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.52□□□□□ -0.25
Sox4Q06831 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.52□□□□□ -0.25
Sox4Q06831 Gm43094-201ENSMUST00000196549 921 ntBASIC13.52□□□□□ -0.25
Sox4Q06831 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.52□□□□□ -0.25
Sox4Q06831 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox4Q06831 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.52□□□□□ -0.25
Sox4Q06831 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.52□□□□□ -0.25
Sox4Q06831 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.52□□□□□ -0.25
Sox4Q06831 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox4Q06831 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox4Q06831 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox4Q06831 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.52□□□□□ -0.25
Sox4Q06831 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Sox4Q06831 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox4Q06831 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox4Q06831 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Sox4Q06831 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox4Q06831 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox4Q06831 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox4Q06831 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.51□□□□□ -0.25
Sox4Q06831 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Sox4Q06831 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.51□□□□□ -0.25
Sox4Q06831 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox4Q06831 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox4Q06831 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox4Q06831 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms