Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.8□□□□□ -0.52
Smn1P97801 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smn1P97801 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smn1P97801 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smn1P97801 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smn1P97801 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smn1P97801 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smn1P97801 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smn1P97801 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smn1P97801 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smn1P97801 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.8□□□□□ -0.52
Smn1P97801 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.8□□□□□ -0.52
Smn1P97801 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smn1P97801 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Smn1P97801 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smn1P97801 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Smn1P97801 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smn1P97801 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smn1P97801 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Smn1P97801 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smn1P97801 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smn1P97801 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smn1P97801 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smn1P97801 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Smn1P97801 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smn1P97801 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smn1P97801 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Smn1P97801 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Smn1P97801 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Smn1P97801 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Gm15427-201ENSMUST00000117288 531 ntBASIC11.79□□□□□ -0.52
Smn1P97801 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.79□□□□□ -0.52
Smn1P97801 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.79□□□□□ -0.52
Smn1P97801 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Gm25925-201ENSMUST00000158314 306 ntBASIC11.79□□□□□ -0.52
Smn1P97801 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.79□□□□□ -0.52
Smn1P97801 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Smn1P97801 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Smn1P97801 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Smn1P97801 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.79□□□□□ -0.52
Smn1P97801 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Smn1P97801 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.79□□□□□ -0.52
Smn1P97801 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Smn1P97801 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smn1P97801 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smn1P97801 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smn1P97801 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smn1P97801 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smn1P97801 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smn1P97801 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smn1P97801 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smn1P97801 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.78□□□□□ -0.52
Smn1P97801 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smn1P97801 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.78□□□□□ -0.52
Smn1P97801 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smn1P97801 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Smn1P97801 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.78□□□□□ -0.52
Smn1P97801 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.78□□□□□ -0.52
Smn1P97801 Gm20553-201ENSMUST00000204205 844 ntBASIC11.78□□□□□ -0.52
Smn1P97801 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.78□□□□□ -0.52
Smn1P97801 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.78□□□□□ -0.52
Smn1P97801 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Smn1P97801 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smn1P97801 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smn1P97801 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smn1P97801 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smn1P97801 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smn1P97801 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smn1P97801 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smn1P97801 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms