Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Npas1P97459 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npas1P97459 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Npas1P97459 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npas1P97459 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npas1P97459 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Npas1P97459 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npas1P97459 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npas1P97459 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Npas1P97459 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npas1P97459 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npas1P97459 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npas1P97459 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npas1P97459 Gm7862-201ENSMUST00000121461 292 ntBASIC11.56□□□□□ -0.56
Npas1P97459 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.56□□□□□ -0.56
Npas1P97459 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Npas1P97459 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Npas1P97459 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Npas1P97459 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npas1P97459 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.56□□□□□ -0.56
Npas1P97459 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.56□□□□□ -0.56
Npas1P97459 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npas1P97459 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npas1P97459 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Npas1P97459 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Npas1P97459 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npas1P97459 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npas1P97459 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npas1P97459 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.56□□□□□ -0.56
Npas1P97459 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Npas1P97459 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npas1P97459 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Npas1P97459 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Npas1P97459 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Npas1P97459 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.55□□□□□ -0.56
Npas1P97459 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Npas1P97459 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Npas1P97459 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Npas1P97459 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Npas1P97459 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Npas1P97459 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Npas1P97459 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Npas1P97459 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Npas1P97459 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Npas1P97459 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Npas1P97459 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Npas1P97459 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Npas1P97459 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.55□□□□□ -0.56
Npas1P97459 Gm37230-201ENSMUST00000194491 818 ntBASIC11.55□□□□□ -0.56
Npas1P97459 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Npas1P97459 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Npas1P97459 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Npas1P97459 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Npas1P97459 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Npas1P97459 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.55□□□□□ -0.56
Npas1P97459 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Npas1P97459 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Npas1P97459 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Npas1P97459 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Npas1P97459 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Npas1P97459 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Npas1P97459 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Npas1P97459 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Npas1P97459 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.55□□□□□ -0.56
Npas1P97459 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.55□□□□□ -0.56
Npas1P97459 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Npas1P97459 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Npas1P97459 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Npas1P97459 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.55□□□□□ -0.56
Npas1P97459 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Npas1P97459 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Npas1P97459 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.54□□□□□ -0.56
Npas1P97459 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.54□□□□□ -0.56
Npas1P97459 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Npas1P97459 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 Gm11452-201ENSMUST00000122376 690 ntBASIC11.54□□□□□ -0.56
Npas1P97459 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.54□□□□□ -0.56
Npas1P97459 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
Npas1P97459 AV026068-213ENSMUST00000223675 1171 ntBASIC11.54□□□□□ -0.56
Npas1P97459 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.54□□□□□ -0.56
Npas1P97459 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.54□□□□□ -0.56
Npas1P97459 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.54□□□□□ -0.56
Npas1P97459 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms