Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx3P70354 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx3P70354 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx3P70354 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx3P70354 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Msx3P70354 Gm13385-201ENSMUST00000121089 220 ntBASIC14.17□□□□□ -0.14
Msx3P70354 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Msx3P70354 Gm27321-201ENSMUST00000185021 205 ntBASIC14.17□□□□□ -0.14
Msx3P70354 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.17□□□□□ -0.14
Msx3P70354 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx3P70354 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx3P70354 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Msx3P70354 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Msx3P70354 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.17□□□□□ -0.14
Msx3P70354 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx3P70354 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Msx3P70354 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Msx3P70354 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx3P70354 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx3P70354 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx3P70354 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx3P70354 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.17□□□□□ -0.14
Msx3P70354 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx3P70354 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx3P70354 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Msx3P70354 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msx3P70354 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msx3P70354 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.16□□□□□ -0.14
Msx3P70354 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msx3P70354 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msx3P70354 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Msx3P70354 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msx3P70354 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.16□□□□□ -0.14
Msx3P70354 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msx3P70354 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Msx3P70354 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.16□□□□□ -0.14
Msx3P70354 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Msx3P70354 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Msx3P70354 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.16□□□□□ -0.14
Msx3P70354 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.16□□□□□ -0.14
Msx3P70354 Gm6888-201ENSMUST00000221983 706 ntBASIC14.16□□□□□ -0.14
Msx3P70354 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Msx3P70354 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.16□□□□□ -0.14
Msx3P70354 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msx3P70354 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msx3P70354 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msx3P70354 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msx3P70354 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Msx3P70354 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.15□□□□□ -0.14
Msx3P70354 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.15□□□□□ -0.14
Msx3P70354 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Msx3P70354 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Msx3P70354 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Msx3P70354 Gm13453-201ENSMUST00000118708 357 ntBASIC14.15□□□□□ -0.14
Msx3P70354 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Gm24420-201ENSMUST00000176676 59 ntBASIC14.15□□□□□ -0.14
Msx3P70354 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Msx3P70354 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.15□□□□□ -0.14
Msx3P70354 Gm43703-201ENSMUST00000200523 763 ntBASIC14.15□□□□□ -0.14
Msx3P70354 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.15□□□□□ -0.14
Msx3P70354 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Msx3P70354 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.15□□□□□ -0.14
Msx3P70354 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msx3P70354 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Msx3P70354 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.14□□□□□ -0.15
Msx3P70354 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Msx3P70354 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Msx3P70354 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Msx3P70354 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msx3P70354 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.14□□□□□ -0.15
Msx3P70354 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Msx3P70354 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Msx3P70354 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msx3P70354 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms