Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Lsm6P62313 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Lsm6P62313 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Lsm6P62313 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm6P62313 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm6P62313 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lsm6P62313 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lsm6P62313 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm6P62313 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm6P62313 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm6P62313 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm6P62313 Matn2-206ENSMUST00000228570 2798 ntBASIC12.1□□□□□ -0.47
Lsm6P62313 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm6P62313 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm6P62313 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.1□□□□□ -0.47
Lsm6P62313 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm6P62313 Gm13385-201ENSMUST00000121089 220 ntBASIC12.1□□□□□ -0.47
Lsm6P62313 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lsm6P62313 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.1□□□□□ -0.47
Lsm6P62313 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm6P62313 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.1□□□□□ -0.47
Lsm6P62313 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm6P62313 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm6P62313 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm6P62313 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lsm6P62313 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Lsm6P62313 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm6P62313 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.1□□□□□ -0.47
Lsm6P62313 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Lsm6P62313 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm6P62313 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Lsm6P62313 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm6P62313 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.09□□□□□ -0.47
Lsm6P62313 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Lsm6P62313 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Lsm6P62313 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Gm6912-201ENSMUST00000117218 544 ntBASIC12.09□□□□□ -0.47
Lsm6P62313 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.09□□□□□ -0.47
Lsm6P62313 Gm24420-201ENSMUST00000176676 59 ntBASIC12.09□□□□□ -0.47
Lsm6P62313 Gm38294-201ENSMUST00000192831 381 ntBASIC12.09□□□□□ -0.47
Lsm6P62313 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Lsm6P62313 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.09□□□□□ -0.47
Lsm6P62313 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.09□□□□□ -0.47
Lsm6P62313 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.09□□□□□ -0.47
Lsm6P62313 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.09□□□□□ -0.47
Lsm6P62313 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lsm6P62313 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.09□□□□□ -0.47
Lsm6P62313 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm6P62313 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lsm6P62313 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.08□□□□□ -0.47
Lsm6P62313 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.08□□□□□ -0.47
Lsm6P62313 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lsm6P62313 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm6P62313 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm6P62313 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm6P62313 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm6P62313 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm6P62313 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.08□□□□□ -0.48
Lsm6P62313 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm6P62313 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm6P62313 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms