Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Gm37153-201ENSMUST00000193637 231 ntBASIC9.85□□□□□ -0.83
Cks1bP61025 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC9.85□□□□□ -0.83
Cks1bP61025 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC9.85□□□□□ -0.83
Cks1bP61025 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Cks1bP61025 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Cks1bP61025 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Cks1bP61025 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Zkscan14-203ENSMUST00000198959 2243 ntBASIC9.84□□□□□ -0.83
Cks1bP61025 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Gm5124-202ENSMUST00000132683 2083 ntBASIC9.84□□□□□ -0.83
Cks1bP61025 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Cks1bP61025 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
Cks1bP61025 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.84□□□□□ -0.83
Cks1bP61025 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC9.84□□□□□ -0.83
Cks1bP61025 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC9.84□□□□□ -0.83
Cks1bP61025 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
Cks1bP61025 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Gm27357-201ENSMUST00000183754 135 ntBASIC9.84□□□□□ -0.83
Cks1bP61025 Gm5253-201ENSMUST00000187104 1025 ntBASIC9.84□□□□□ -0.83
Cks1bP61025 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC9.84□□□□□ -0.83
Cks1bP61025 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC9.84□□□□□ -0.83
Cks1bP61025 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Cks1bP61025 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC9.84□□□□□ -0.83
Cks1bP61025 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC9.84□□□□□ -0.83
Cks1bP61025 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC9.84□□□□□ -0.83
Cks1bP61025 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Cks1bP61025 Adra1a-206ENSMUST00000225182 2337 ntBASIC9.84□□□□□ -0.83
Cks1bP61025 Gm5184-201ENSMUST00000220417 1702 ntBASIC9.84□□□□□ -0.83
Cks1bP61025 Gm43417-201ENSMUST00000201586 5207 ntBASIC9.84□□□□□ -0.83
Cks1bP61025 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1bP61025 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC9.84□□□□□ -0.84
Cks1bP61025 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Cks1bP61025 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC9.83□□□□□ -0.84
Cks1bP61025 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Cks1bP61025 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Gm6159-201ENSMUST00000191249 1724 ntBASIC9.83□□□□□ -0.84
Cks1bP61025 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Gm2308-201ENSMUST00000166539 1004 ntBASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms