Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.23□□□□□ -0.45
Sf3b6P59708 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.23□□□□□ -0.45
Sf3b6P59708 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.23□□□□□ -0.45
Sf3b6P59708 Gm6736-201ENSMUST00000166583 948 ntBASIC12.23□□□□□ -0.45
Sf3b6P59708 Gm24513-201ENSMUST00000174964 138 ntBASIC12.23□□□□□ -0.45
Sf3b6P59708 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.23□□□□□ -0.45
Sf3b6P59708 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.23□□□□□ -0.45
Sf3b6P59708 Gm27397-201ENSMUST00000184997 107 ntBASIC12.23□□□□□ -0.45
Sf3b6P59708 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.23□□□□□ -0.45
Sf3b6P59708 Gm42790-201ENSMUST00000201268 969 ntBASIC12.23□□□□□ -0.45
Sf3b6P59708 Gm44719-201ENSMUST00000206404 149 ntBASIC12.23□□□□□ -0.45
Sf3b6P59708 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sf3b6P59708 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.23□□□□□ -0.45
Sf3b6P59708 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.23□□□□□ -0.45
Sf3b6P59708 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3b6P59708 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Sf3b6P59708 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.22□□□□□ -0.45
Sf3b6P59708 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.22□□□□□ -0.45
Sf3b6P59708 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.22□□□□□ -0.45
Sf3b6P59708 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.22□□□□□ -0.45
Sf3b6P59708 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sf3b6P59708 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.22□□□□□ -0.45
Sf3b6P59708 Gm44492-201ENSMUST00000197012 141 ntBASIC12.22□□□□□ -0.45
Sf3b6P59708 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.22□□□□□ -0.45
Sf3b6P59708 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.22□□□□□ -0.45
Sf3b6P59708 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Sf3b6P59708 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.22□□□□□ -0.45
Sf3b6P59708 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.22□□□□□ -0.45
Sf3b6P59708 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.22□□□□□ -0.45
Sf3b6P59708 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sf3b6P59708 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
Sf3b6P59708 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3b6P59708 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.21□□□□□ -0.45
Sf3b6P59708 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.21□□□□□ -0.45
Sf3b6P59708 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms