Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.13□□□□□ -0.63
Sssca1P56873 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Gm18733-201ENSMUST00000173950 856 ntBASIC11.13□□□□□ -0.63
Sssca1P56873 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.13□□□□□ -0.63
Sssca1P56873 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.13□□□□□ -0.63
Sssca1P56873 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.13□□□□□ -0.63
Sssca1P56873 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.13□□□□□ -0.63
Sssca1P56873 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sssca1P56873 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.13□□□□□ -0.63
Sssca1P56873 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sssca1P56873 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Sssca1P56873 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sssca1P56873 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.13□□□□□ -0.63
Sssca1P56873 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.12□□□□□ -0.63
Sssca1P56873 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Sssca1P56873 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sssca1P56873 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sssca1P56873 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.12□□□□□ -0.63
Sssca1P56873 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 AA543401-201ENSMUST00000164248 1269 ntBASIC11.12□□□□□ -0.63
Sssca1P56873 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Sssca1P56873 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sssca1P56873 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Sssca1P56873 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Sssca1P56873 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sssca1P56873 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Sssca1P56873 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sssca1P56873 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.11□□□□□ -0.63
Sssca1P56873 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sssca1P56873 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sssca1P56873 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sssca1P56873 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sssca1P56873 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sssca1P56873 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sssca1P56873 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sssca1P56873 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sssca1P56873 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Sssca1P56873 Gm9727-201ENSMUST00000161387 555 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm17271-201ENSMUST00000165535 355 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sssca1P56873 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Sssca1P56873 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.11□□□□□ -0.63
Sssca1P56873 Gm29310-201ENSMUST00000185468 696 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm21825-201ENSMUST00000185728 696 ntBASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms