Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lim2P56563 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lim2P56563 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Lim2P56563 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lim2P56563 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Lim2P56563 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lim2P56563 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Lim2P56563 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lim2P56563 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
Lim2P56563 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.78□□□□□ -0.2
Lim2P56563 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.78□□□□□ -0.2
Lim2P56563 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.78□□□□□ -0.2
Lim2P56563 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Lim2P56563 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.78□□□□□ -0.2
Lim2P56563 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Lim2P56563 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.78□□□□□ -0.2
Lim2P56563 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lim2P56563 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lim2P56563 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lim2P56563 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Lim2P56563 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lim2P56563 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lim2P56563 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lim2P56563 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Lim2P56563 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lim2P56563 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lim2P56563 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lim2P56563 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Lim2P56563 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lim2P56563 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lim2P56563 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lim2P56563 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lim2P56563 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Lim2P56563 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lim2P56563 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Lim2P56563 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lim2P56563 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lim2P56563 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lim2P56563 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.77□□□□□ -0.2
Lim2P56563 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lim2P56563 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Lim2P56563 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lim2P56563 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lim2P56563 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.77□□□□□ -0.21
Lim2P56563 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lim2P56563 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lim2P56563 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lim2P56563 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lim2P56563 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.77□□□□□ -0.21
Lim2P56563 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.77□□□□□ -0.21
Lim2P56563 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Lim2P56563 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Lim2P56563 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.77□□□□□ -0.21
Lim2P56563 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lim2P56563 Gm28760-201ENSMUST00000185995 736 ntBASIC13.77□□□□□ -0.21
Lim2P56563 Gm29741-201ENSMUST00000192667 421 ntBASIC13.77□□□□□ -0.21
Lim2P56563 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.77□□□□□ -0.21
Lim2P56563 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lim2P56563 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.77□□□□□ -0.21
Lim2P56563 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.77□□□□□ -0.21
Lim2P56563 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.77□□□□□ -0.21
Lim2P56563 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lim2P56563 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lim2P56563 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lim2P56563 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Lim2P56563 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.77□□□□□ -0.21
Lim2P56563 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lim2P56563 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lim2P56563 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.77□□□□□ -0.21
Lim2P56563 Mir497b-201ENSMUST00000093601 125 ntBASIC13.77□□□□□ -0.21
Lim2P56563 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lim2P56563 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lim2P56563 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lim2P56563 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lim2P56563 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lim2P56563 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lim2P56563 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Lim2P56563 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lim2P56563 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.76□□□□□ -0.21
Lim2P56563 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Lim2P56563 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lim2P56563 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lim2P56563 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lim2P56563 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lim2P56563 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lim2P56563 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lim2P56563 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.76□□□□□ -0.21
Lim2P56563 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.76□□□□□ -0.21
Lim2P56563 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Lim2P56563 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.76□□□□□ -0.21
Lim2P56563 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.76□□□□□ -0.21
Lim2P56563 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Lim2P56563 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.76□□□□□ -0.21
Lim2P56563 Gm8927-201ENSMUST00000181978 981 ntBASIC13.76□□□□□ -0.21
Lim2P56563 Gm7063-201ENSMUST00000186840 981 ntBASIC13.76□□□□□ -0.21
Lim2P56563 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Lim2P56563 Gm3222-201ENSMUST00000071282 990 ntBASIC13.76□□□□□ -0.21
Lim2P56563 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Lim2P56563 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lim2P56563 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms