Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdkn2bP55271 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Cdkn2bP55271 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Cdkn2bP55271 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
Cdkn2bP55271 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdkn2bP55271 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cdkn2bP55271 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdkn2bP55271 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdkn2bP55271 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdkn2bP55271 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cdkn2bP55271 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Mir698-201ENSMUST00000102164 109 ntBASIC13.2□□□□□ -0.3
Cdkn2bP55271 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.2□□□□□ -0.3
Cdkn2bP55271 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Dupd1-202ENSMUST00000224735 548 ntBASIC13.2□□□□□ -0.3
Cdkn2bP55271 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.2□□□□□ -0.3
Cdkn2bP55271 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.2□□□□□ -0.3
Cdkn2bP55271 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdkn2bP55271 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.19□□□□□ -0.3
Cdkn2bP55271 Gm12428-201ENSMUST00000119844 727 ntBASIC13.19□□□□□ -0.3
Cdkn2bP55271 Gm13365-201ENSMUST00000121188 973 ntBASIC13.19□□□□□ -0.3
Cdkn2bP55271 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.19□□□□□ -0.3
Cdkn2bP55271 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.19□□□□□ -0.3
Cdkn2bP55271 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.19□□□□□ -0.3
Cdkn2bP55271 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.19□□□□□ -0.3
Cdkn2bP55271 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Cdkn2bP55271 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.19□□□□□ -0.3
Cdkn2bP55271 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdkn2bP55271 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.18□□□□□ -0.3
Cdkn2bP55271 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms