Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.21□□□□□ -0.29
Sox3P53784 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox3P53784 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox3P53784 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox3P53784 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.21□□□□□ -0.29
Sox3P53784 Snora78-201ENSMUST00000158630 128 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm17420-201ENSMUST00000164753 153 ntBASIC13.21□□□□□ -0.29
Sox3P53784 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox3P53784 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Sox3P53784 Gm27631-201ENSMUST00000184163 466 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm29310-201ENSMUST00000185468 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm21825-201ENSMUST00000185728 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm29109-201ENSMUST00000185895 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm21896-201ENSMUST00000186520 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm21873-201ENSMUST00000186728 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm21794-201ENSMUST00000187056 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm21880-201ENSMUST00000187275 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm21826-201ENSMUST00000187451 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm21198-201ENSMUST00000188393 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm21749-201ENSMUST00000189343 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm21901-201ENSMUST00000189568 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm29424-201ENSMUST00000189716 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm28599-201ENSMUST00000189838 694 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm21867-201ENSMUST00000189917 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm29269-201ENSMUST00000190087 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm21722-201ENSMUST00000190153 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm28423-201ENSMUST00000190701 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm21899-201ENSMUST00000190745 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm21910-201ENSMUST00000191163 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm21849-201ENSMUST00000191571 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm28678-201ENSMUST00000191593 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm37424-201ENSMUST00000191727 561 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm20910-201ENSMUST00000193268 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Gm21871-201ENSMUST00000194621 696 ntBASIC13.21□□□□□ -0.29
Sox3P53784 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.21□□□□□ -0.29
Sox3P53784 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Sox3P53784 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox3P53784 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox3P53784 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox3P53784 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox3P53784 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox3P53784 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
Sox3P53784 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Sox3P53784 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sox3P53784 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox3P53784 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox3P53784 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox3P53784 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox3P53784 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Sox3P53784 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.21□□□□□ -0.3
Sox3P53784 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox3P53784 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox3P53784 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox3P53784 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.21□□□□□ -0.3
Sox3P53784 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox3P53784 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox3P53784 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sox3P53784 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.2□□□□□ -0.3
Sox3P53784 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Sox3P53784 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sox3P53784 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Sox3P53784 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Sox3P53784 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sox3P53784 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Sox3P53784 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.2□□□□□ -0.3
Sox3P53784 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.2□□□□□ -0.3
Sox3P53784 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.2□□□□□ -0.3
Sox3P53784 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Sox3P53784 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sox3P53784 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sox3P53784 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox3P53784 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox3P53784 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox3P53784 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox3P53784 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox3P53784 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms