Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm37042-201ENSMUST00000193816 581 ntBASIC13.29□□□□□ -0.28
Lbx1P52955 Gm31256-201ENSMUST00000194705 506 ntBASIC13.29□□□□□ -0.28
Lbx1P52955 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.29□□□□□ -0.28
Lbx1P52955 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 Gm30285-201ENSMUST00000214614 422 ntBASIC13.29□□□□□ -0.28
Lbx1P52955 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.29□□□□□ -0.28
Lbx1P52955 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.29□□□□□ -0.28
Lbx1P52955 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Lbx1P52955 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Lbx1P52955 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Lbx1P52955 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lbx1P52955 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lbx1P52955 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.28□□□□□ -0.28
Lbx1P52955 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lbx1P52955 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lbx1P52955 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.28□□□□□ -0.28
Lbx1P52955 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lbx1P52955 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Lbx1P52955 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lbx1P52955 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lbx1P52955 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lbx1P52955 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lbx1P52955 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lbx1P52955 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lbx1P52955 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.28□□□□□ -0.28
Lbx1P52955 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Lbx1P52955 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lbx1P52955 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lbx1P52955 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.28□□□□□ -0.28
Lbx1P52955 Gm11591-201ENSMUST00000120063 702 ntBASIC13.28□□□□□ -0.28
Lbx1P52955 Gm13385-201ENSMUST00000121089 220 ntBASIC13.28□□□□□ -0.28
Lbx1P52955 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.28□□□□□ -0.28
Lbx1P52955 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.28□□□□□ -0.28
Lbx1P52955 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lbx1P52955 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.28□□□□□ -0.28
Lbx1P52955 Gm38317-201ENSMUST00000195564 343 ntBASIC13.28□□□□□ -0.28
Lbx1P52955 Gm37922-201ENSMUST00000195596 455 ntBASIC13.28□□□□□ -0.28
Lbx1P52955 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.28□□□□□ -0.28
Lbx1P52955 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.28□□□□□ -0.28
Lbx1P52955 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lbx1P52955 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lbx1P52955 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Lbx1P52955 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lbx1P52955 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.28□□□□□ -0.28
Lbx1P52955 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lbx1P52955 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.28□□□□□ -0.28
Lbx1P52955 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lbx1P52955 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lbx1P52955 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lbx1P52955 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lbx1P52955 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lbx1P52955 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lbx1P52955 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lbx1P52955 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.27□□□□□ -0.28
Lbx1P52955 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lbx1P52955 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lbx1P52955 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lbx1P52955 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lbx1P52955 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.27□□□□□ -0.28
Lbx1P52955 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lbx1P52955 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lbx1P52955 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lbx1P52955 Gm7809-201ENSMUST00000153199 742 ntBASIC13.27□□□□□ -0.29
Lbx1P52955 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lbx1P52955 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.27□□□□□ -0.29
Lbx1P52955 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.27□□□□□ -0.29
Lbx1P52955 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lbx1P52955 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.27□□□□□ -0.29
Lbx1P52955 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.27□□□□□ -0.29
Lbx1P52955 Gm8385-201ENSMUST00000058999 643 ntBASIC13.27□□□□□ -0.29
Lbx1P52955 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lbx1P52955 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lbx1P52955 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lbx1P52955 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lbx1P52955 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.27□□□□□ -0.29
Lbx1P52955 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lbx1P52955 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lbx1P52955 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lbx1P52955 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lbx1P52955 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lbx1P52955 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lbx1P52955 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lbx1P52955 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Lbx1P52955 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lbx1P52955 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lbx1P52955 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lbx1P52955 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lbx1P52955 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms