Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.04□□□□□ -0.32
RoraP51448 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.04□□□□□ -0.32
RoraP51448 Gm43433-201ENSMUST00000196573 481 ntBASIC13.04□□□□□ -0.32
RoraP51448 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.04□□□□□ -0.32
RoraP51448 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.04□□□□□ -0.32
RoraP51448 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RoraP51448 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
RoraP51448 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
RoraP51448 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.04□□□□□ -0.32
RoraP51448 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RoraP51448 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RoraP51448 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RoraP51448 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RoraP51448 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RoraP51448 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RoraP51448 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RoraP51448 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RoraP51448 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RoraP51448 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RoraP51448 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RoraP51448 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RoraP51448 Gm14127-201ENSMUST00000117906 678 ntBASIC13.03□□□□□ -0.32
RoraP51448 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.03□□□□□ -0.32
RoraP51448 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RoraP51448 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.03□□□□□ -0.32
RoraP51448 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RoraP51448 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.03□□□□□ -0.32
RoraP51448 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.03□□□□□ -0.32
RoraP51448 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.03□□□□□ -0.32
RoraP51448 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RoraP51448 Gm18307-201ENSMUST00000206864 949 ntBASIC13.03□□□□□ -0.32
RoraP51448 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.03□□□□□ -0.32
RoraP51448 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.03□□□□□ -0.32
RoraP51448 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.03□□□□□ -0.32
RoraP51448 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RoraP51448 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RoraP51448 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.03□□□□□ -0.32
RoraP51448 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RoraP51448 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RoraP51448 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
RoraP51448 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RoraP51448 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.02□□□□□ -0.32
RoraP51448 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.02□□□□□ -0.32
RoraP51448 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RoraP51448 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.02□□□□□ -0.32
RoraP51448 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.02□□□□□ -0.32
RoraP51448 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RoraP51448 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
RoraP51448 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
RoraP51448 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
RoraP51448 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RoraP51448 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
RoraP51448 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.02□□□□□ -0.32
RoraP51448 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
RoraP51448 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
RoraP51448 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.02□□□□□ -0.33
RoraP51448 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.02□□□□□ -0.33
RoraP51448 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.02□□□□□ -0.33
RoraP51448 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.02□□□□□ -0.33
RoraP51448 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Gm9002-201ENSMUST00000178437 499 ntBASIC13.02□□□□□ -0.33
RoraP51448 Gm8927-201ENSMUST00000181978 981 ntBASIC13.02□□□□□ -0.33
RoraP51448 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.02□□□□□ -0.33
RoraP51448 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.02□□□□□ -0.33
RoraP51448 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Gm3222-201ENSMUST00000071282 990 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms