Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Brca1P48754 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Brca1P48754 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Brca1P48754 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Brca1P48754 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Brca1P48754 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Brca1P48754 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Brca1P48754 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Brca1P48754 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.17■□□□□ 0.02
Brca1P48754 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
Brca1P48754 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.17■□□□□ 0.02
Brca1P48754 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC15.17■□□□□ 0.02
Brca1P48754 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC15.17■□□□□ 0.02
Brca1P48754 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Brca1P48754 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Brca1P48754 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Brca1P48754 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Brca1P48754 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Brca1P48754 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Brca1P48754 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Brca1P48754 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Brca1P48754 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Brca1P48754 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.16■□□□□ 0.02
Brca1P48754 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Brca1P48754 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Brca1P48754 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Brca1P48754 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Brca1P48754 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.16■□□□□ 0.02
Brca1P48754 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Brca1P48754 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Brca1P48754 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Brca1P48754 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Brca1P48754 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Brca1P48754 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Brca1P48754 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Brca1P48754 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Brca1P48754 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Brca1P48754 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Brca1P48754 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Brca1P48754 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Brca1P48754 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Brca1P48754 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Brca1P48754 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Brca1P48754 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC15.15■□□□□ 0.02
Brca1P48754 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC15.15■□□□□ 0.02
Brca1P48754 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC15.15■□□□□ 0.02
Brca1P48754 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC15.15■□□□□ 0.02
Brca1P48754 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.15■□□□□ 0.02
Brca1P48754 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC15.15■□□□□ 0.02
Brca1P48754 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC15.15■□□□□ 0.02
Brca1P48754 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.15■□□□□ 0.02
Brca1P48754 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Brca1P48754 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.15■□□□□ 0.02
Brca1P48754 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Brca1P48754 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 Gm14726-201ENSMUST00000120623 896 ntBASIC15.15■□□□□ 0.02
Brca1P48754 Gm12134-201ENSMUST00000122109 520 ntBASIC15.15■□□□□ 0.02
Brca1P48754 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC15.15■□□□□ 0.02
Brca1P48754 Gm8546-201ENSMUST00000178288 1264 ntBASIC15.15■□□□□ 0.02
Brca1P48754 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 AA914427-201ENSMUST00000193194 1166 ntBASIC15.15■□□□□ 0.02
Brca1P48754 Gm18212-201ENSMUST00000211678 889 ntBASIC15.15■□□□□ 0.02
Brca1P48754 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Brca1P48754 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.15■□□□□ 0.02
Brca1P48754 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.15■□□□□ 0.02
Brca1P48754 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.15■□□□□ 0.02
Brca1P48754 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.15■□□□□ 0.02
Brca1P48754 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca1P48754 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.14■□□□□ 0.01
Brca1P48754 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Brca1P48754 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Brca1P48754 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Brca1P48754 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Brca1P48754 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Brca1P48754 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Brca1P48754 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Brca1P48754 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Brca1P48754 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms