Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf4P43488 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Gm27525-201ENSMUST00000184465 107 ntBASIC13.3□□□□□ -0.28
Tnfsf4P43488 Gm8000-201ENSMUST00000188378 592 ntBASIC13.3□□□□□ -0.28
Tnfsf4P43488 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Gm29541-201ENSMUST00000191351 678 ntBASIC13.3□□□□□ -0.28
Tnfsf4P43488 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.3□□□□□ -0.28
Tnfsf4P43488 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Gm18041-201ENSMUST00000218210 618 ntBASIC13.3□□□□□ -0.28
Tnfsf4P43488 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.3□□□□□ -0.28
Tnfsf4P43488 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Tnfsf4P43488 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf4P43488 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.29□□□□□ -0.28
Tnfsf4P43488 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.29□□□□□ -0.28
Tnfsf4P43488 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.29□□□□□ -0.28
Tnfsf4P43488 Mir6990-201ENSMUST00000183724 91 ntBASIC13.29□□□□□ -0.28
Tnfsf4P43488 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 AW822252-206ENSMUST00000208904 237 ntBASIC13.29□□□□□ -0.28
Tnfsf4P43488 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf4P43488 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms