Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.58□□□□□ -0.56
Mmp9P41245 Gm13036-201ENSMUST00000117799 748 ntBASIC11.58□□□□□ -0.56
Mmp9P41245 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Mmp9P41245 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.58□□□□□ -0.56
Mmp9P41245 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 Gm27628-201ENSMUST00000184911 107 ntBASIC11.58□□□□□ -0.56
Mmp9P41245 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Mmp9P41245 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.58□□□□□ -0.56
Mmp9P41245 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.58□□□□□ -0.56
Mmp9P41245 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.58□□□□□ -0.56
Mmp9P41245 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Mmp9P41245 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Mmp9P41245 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Mmp9P41245 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Mmp9P41245 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Mmp9P41245 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.58□□□□□ -0.56
Mmp9P41245 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.58□□□□□ -0.56
Mmp9P41245 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.58□□□□□ -0.56
Mmp9P41245 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Mmp9P41245 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Mmp9P41245 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Mmp9P41245 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Mmp9P41245 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Mmp9P41245 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Mmp9P41245 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Mmp9P41245 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Gm11764-201ENSMUST00000120221 623 ntBASIC11.57□□□□□ -0.56
Mmp9P41245 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.57□□□□□ -0.56
Mmp9P41245 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.57□□□□□ -0.56
Mmp9P41245 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.57□□□□□ -0.56
Mmp9P41245 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.57□□□□□ -0.56
Mmp9P41245 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.57□□□□□ -0.56
Mmp9P41245 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Mmp9P41245 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.57□□□□□ -0.56
Mmp9P41245 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Mmp9P41245 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Mmp9P41245 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.57□□□□□ -0.56
Mmp9P41245 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.57□□□□□ -0.56
Mmp9P41245 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.57□□□□□ -0.56
Mmp9P41245 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Mmp9P41245 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.56□□□□□ -0.56
Mmp9P41245 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Pck2-205ENSMUST00000226352 2784 ntBASIC11.56□□□□□ -0.56
Mmp9P41245 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.56□□□□□ -0.56
Mmp9P41245 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.56□□□□□ -0.56
Mmp9P41245 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.56□□□□□ -0.56
Mmp9P41245 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Mmp9P41245 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.56□□□□□ -0.56
Mmp9P41245 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms