Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Abca1P41233 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Abca1P41233 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Abca1P41233 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.47□□□□□ -0.57
Abca1P41233 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.47□□□□□ -0.57
Abca1P41233 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Abca1P41233 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Abca1P41233 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.47□□□□□ -0.57
Abca1P41233 Gm11524-201ENSMUST00000119349 807 ntBASIC11.47□□□□□ -0.57
Abca1P41233 Gm9726-201ENSMUST00000180321 678 ntBASIC11.47□□□□□ -0.57
Abca1P41233 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Gm17795-201ENSMUST00000214505 757 ntBASIC11.47□□□□□ -0.57
Abca1P41233 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Abca1P41233 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Abca1P41233 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Abca1P41233 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Abca1P41233 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Abca1P41233 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Abca1P41233 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Abca1P41233 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Abca1P41233 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Abca1P41233 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.46□□□□□ -0.57
Abca1P41233 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Abca1P41233 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.46□□□□□ -0.57
Abca1P41233 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Abca1P41233 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Abca1P41233 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Abca1P41233 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.46□□□□□ -0.57
Abca1P41233 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Abca1P41233 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Abca1P41233 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Abca1P41233 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.46□□□□□ -0.57
Abca1P41233 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Abca1P41233 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Abca1P41233 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.46□□□□□ -0.58
Abca1P41233 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.46□□□□□ -0.58
Abca1P41233 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.46□□□□□ -0.58
Abca1P41233 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Abca1P41233 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Abca1P41233 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Abca1P41233 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
Abca1P41233 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Abca1P41233 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Abca1P41233 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Abca1P41233 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Abca1P41233 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Abca1P41233 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Abca1P41233 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.46□□□□□ -0.58
Abca1P41233 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Abca1P41233 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.46□□□□□ -0.58
Abca1P41233 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Abca1P41233 Gm28911-201ENSMUST00000188837 117 ntBASIC11.46□□□□□ -0.58
Abca1P41233 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.46□□□□□ -0.58
Abca1P41233 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Abca1P41233 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Abca1P41233 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Abca1P41233 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abca1P41233 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abca1P41233 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Abca1P41233 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abca1P41233 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abca1P41233 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abca1P41233 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abca1P41233 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Abca1P41233 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Abca1P41233 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abca1P41233 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Abca1P41233 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Abca1P41233 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abca1P41233 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Abca1P41233 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.45□□□□□ -0.58
Abca1P41233 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.45□□□□□ -0.58
Abca1P41233 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.45□□□□□ -0.58
Abca1P41233 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.45□□□□□ -0.58
Abca1P41233 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.45□□□□□ -0.58
Abca1P41233 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.45□□□□□ -0.58
Abca1P41233 Gm10275-202ENSMUST00000168697 495 ntBASIC11.45□□□□□ -0.58
Abca1P41233 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abca1P41233 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Abca1P41233 Gm10275-201ENSMUST00000092620 635 ntBASIC11.45□□□□□ -0.58
Abca1P41233 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abca1P41233 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms