Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Cdh4P39038 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cdh4P39038 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Gm6912-201ENSMUST00000117218 544 ntBASIC13.2□□□□□ -0.3
Cdh4P39038 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.2□□□□□ -0.3
Cdh4P39038 Gm13385-201ENSMUST00000121089 220 ntBASIC13.2□□□□□ -0.3
Cdh4P39038 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Gm8927-201ENSMUST00000181978 981 ntBASIC13.2□□□□□ -0.3
Cdh4P39038 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.2□□□□□ -0.3
Cdh4P39038 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.2□□□□□ -0.3
Cdh4P39038 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.2□□□□□ -0.3
Cdh4P39038 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Gm3222-201ENSMUST00000071282 990 ntBASIC13.2□□□□□ -0.3
Cdh4P39038 Gm2423-201ENSMUST00000074863 733 ntBASIC13.2□□□□□ -0.3
Cdh4P39038 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cdh4P39038 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cdh4P39038 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.2□□□□□ -0.3
Cdh4P39038 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh4P39038 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.19□□□□□ -0.3
Cdh4P39038 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Cdh4P39038 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.19□□□□□ -0.3
Cdh4P39038 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdh4P39038 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdh4P39038 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Cdh4P39038 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.19□□□□□ -0.3
Cdh4P39038 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.19□□□□□ -0.3
Cdh4P39038 Gm28760-201ENSMUST00000185995 736 ntBASIC13.19□□□□□ -0.3
Cdh4P39038 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdh4P39038 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.19□□□□□ -0.3
Cdh4P39038 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cdh4P39038 Mir497b-201ENSMUST00000093601 125 ntBASIC13.19□□□□□ -0.3
Cdh4P39038 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cdh4P39038 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cdh4P39038 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Cdh4P39038 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh4P39038 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh4P39038 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh4P39038 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdh4P39038 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdh4P39038 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.18□□□□□ -0.3
Cdh4P39038 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh4P39038 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh4P39038 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh4P39038 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh4P39038 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh4P39038 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Cdh4P39038 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cdh4P39038 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh4P39038 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdh4P39038 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh4P39038 Mir698-201ENSMUST00000102164 109 ntBASIC13.18□□□□□ -0.3
Cdh4P39038 Gm22189-201ENSMUST00000103822 86 ntBASIC13.18□□□□□ -0.3
Cdh4P39038 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 105.2 ms