Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Foxa1P35582 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Foxa1P35582 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Foxa1P35582 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.74□□□□□ -0.37
Foxa1P35582 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.74□□□□□ -0.37
Foxa1P35582 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Gm15240-201ENSMUST00000118156 720 ntBASIC12.74□□□□□ -0.37
Foxa1P35582 Gm25925-201ENSMUST00000158314 306 ntBASIC12.74□□□□□ -0.37
Foxa1P35582 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Foxa1P35582 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.74□□□□□ -0.37
Foxa1P35582 Gm18905-201ENSMUST00000205454 928 ntBASIC12.74□□□□□ -0.37
Foxa1P35582 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.74□□□□□ -0.37
Foxa1P35582 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Foxa1P35582 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.74□□□□□ -0.37
Foxa1P35582 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.74□□□□□ -0.37
Foxa1P35582 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Foxa1P35582 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Foxa1P35582 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.74□□□□□ -0.37
Foxa1P35582 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Foxa1P35582 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Foxa1P35582 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Foxa1P35582 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Foxa1P35582 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Foxa1P35582 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Foxa1P35582 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.73□□□□□ -0.37
Foxa1P35582 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Foxa1P35582 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.73□□□□□ -0.37
Foxa1P35582 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Foxa1P35582 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Foxa1P35582 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Foxa1P35582 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Foxa1P35582 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.73□□□□□ -0.37
Foxa1P35582 Mir6977-201ENSMUST00000184960 64 ntBASIC12.73□□□□□ -0.37
Foxa1P35582 Gm44855-201ENSMUST00000205725 362 ntBASIC12.73□□□□□ -0.37
Foxa1P35582 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.73□□□□□ -0.37
Foxa1P35582 Gm7730-201ENSMUST00000212486 454 ntBASIC12.73□□□□□ -0.37
Foxa1P35582 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.73□□□□□ -0.37
Foxa1P35582 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Foxa1P35582 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Foxa1P35582 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Foxa1P35582 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Foxa1P35582 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.73□□□□□ -0.37
Foxa1P35582 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Foxa1P35582 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Foxa1P35582 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Foxa1P35582 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Foxa1P35582 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Foxa1P35582 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Foxa1P35582 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Foxa1P35582 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Foxa1P35582 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Foxa1P35582 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Foxa1P35582 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Foxa1P35582 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Foxa1P35582 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.72□□□□□ -0.37
Foxa1P35582 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Foxa1P35582 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Foxa1P35582 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Foxa1P35582 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Foxa1P35582 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.72□□□□□ -0.37
Foxa1P35582 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Foxa1P35582 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Foxa1P35582 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Foxa1P35582 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Foxa1P35582 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.72□□□□□ -0.37
Foxa1P35582 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.72□□□□□ -0.37
Foxa1P35582 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.72□□□□□ -0.37
Foxa1P35582 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.72□□□□□ -0.37
Foxa1P35582 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Foxa1P35582 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Foxa1P35582 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.72□□□□□ -0.37
Foxa1P35582 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Foxa1P35582 Gm6218-201ENSMUST00000219812 628 ntBASIC12.72□□□□□ -0.37
Foxa1P35582 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Foxa1P35582 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms