Protein–RNA interactions for Protein: P32972

Tnfsf8, Tumor necrosis factor ligand superfamily member 8, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf8P32972 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf8P32972 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf8P32972 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.4□□□□□ -0.58
Tnfsf8P32972 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf8P32972 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfsf8P32972 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Tnfsf8P32972 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfsf8P32972 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
Tnfsf8P32972 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfsf8P32972 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.39□□□□□ -0.59
Tnfsf8P32972 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.39□□□□□ -0.59
Tnfsf8P32972 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Gm2810-201ENSMUST00000118681 990 ntBASIC11.39□□□□□ -0.59
Tnfsf8P32972 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.39□□□□□ -0.59
Tnfsf8P32972 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Gm18737-201ENSMUST00000173594 937 ntBASIC11.39□□□□□ -0.59
Tnfsf8P32972 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.39□□□□□ -0.59
Tnfsf8P32972 Gm38225-201ENSMUST00000194001 393 ntBASIC11.39□□□□□ -0.59
Tnfsf8P32972 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.39□□□□□ -0.59
Tnfsf8P32972 Gm18057-201ENSMUST00000208220 503 ntBASIC11.39□□□□□ -0.59
Tnfsf8P32972 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.39□□□□□ -0.59
Tnfsf8P32972 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.39□□□□□ -0.59
Tnfsf8P32972 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.39□□□□□ -0.59
Tnfsf8P32972 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf8P32972 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf8P32972 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf8P32972 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf8P32972 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf8P32972 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf8P32972 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf8P32972 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf8P32972 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf8P32972 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf8P32972 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf8P32972 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.38□□□□□ -0.59
Tnfsf8P32972 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.38□□□□□ -0.59
Tnfsf8P32972 Gm15957-201ENSMUST00000118893 974 ntBASIC11.38□□□□□ -0.59
Tnfsf8P32972 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms