Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Rom1P32958 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rom1P32958 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rom1P32958 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rom1P32958 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.89□□□□□ -0.67
Rom1P32958 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Rom1P32958 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rom1P32958 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC10.89□□□□□ -0.67
Rom1P32958 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Mir874-201ENSMUST00000104769 76 ntBASIC10.89□□□□□ -0.67
Rom1P32958 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC10.89□□□□□ -0.67
Rom1P32958 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rom1P32958 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC10.89□□□□□ -0.67
Rom1P32958 Gm27300-201ENSMUST00000184085 97 ntBASIC10.89□□□□□ -0.67
Rom1P32958 Gm27335-201ENSMUST00000184758 97 ntBASIC10.89□□□□□ -0.67
Rom1P32958 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Rom1P32958 Gm43347-201ENSMUST00000200226 580 ntBASIC10.89□□□□□ -0.67
Rom1P32958 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Rom1P32958 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.89□□□□□ -0.67
Rom1P32958 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.89□□□□□ -0.67
Rom1P32958 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rom1P32958 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Rom1P32958 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.89□□□□□ -0.67
Rom1P32958 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Rom1P32958 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Rom1P32958 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.88□□□□□ -0.67
Rom1P32958 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rom1P32958 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.88□□□□□ -0.67
Rom1P32958 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rom1P32958 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC10.88□□□□□ -0.67
Rom1P32958 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC10.88□□□□□ -0.67
Rom1P32958 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC10.88□□□□□ -0.67
Rom1P32958 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC10.88□□□□□ -0.67
Rom1P32958 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Syt7-205ENSMUST00000224135 1557 ntBASIC10.88□□□□□ -0.67
Rom1P32958 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rom1P32958 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rom1P32958 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Rom1P32958 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rom1P32958 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms