Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
VtnP29788 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VtnP29788 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VtnP29788 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
VtnP29788 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.5□□□□□ -0.41
VtnP29788 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VtnP29788 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
VtnP29788 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
VtnP29788 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.49□□□□□ -0.41
VtnP29788 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.49□□□□□ -0.41
VtnP29788 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
VtnP29788 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
VtnP29788 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.49□□□□□ -0.41
VtnP29788 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.49□□□□□ -0.41
VtnP29788 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.49□□□□□ -0.41
VtnP29788 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
VtnP29788 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.49□□□□□ -0.41
VtnP29788 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.49□□□□□ -0.41
VtnP29788 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Gm6180-201ENSMUST00000065243 498 ntBASIC12.49□□□□□ -0.41
VtnP29788 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.49□□□□□ -0.41
VtnP29788 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VtnP29788 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
VtnP29788 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
VtnP29788 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VtnP29788 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.48□□□□□ -0.41
VtnP29788 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
VtnP29788 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
VtnP29788 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.48□□□□□ -0.41
VtnP29788 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
VtnP29788 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
VtnP29788 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.48□□□□□ -0.41
VtnP29788 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.48□□□□□ -0.41
VtnP29788 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 Gm12138-201ENSMUST00000122180 951 ntBASIC12.48□□□□□ -0.41
VtnP29788 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 Gm8927-201ENSMUST00000181978 981 ntBASIC12.48□□□□□ -0.41
VtnP29788 Gm2445-201ENSMUST00000182798 989 ntBASIC12.48□□□□□ -0.41
VtnP29788 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.48□□□□□ -0.41
VtnP29788 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.48□□□□□ -0.41
VtnP29788 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.48□□□□□ -0.41
VtnP29788 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.48□□□□□ -0.41
VtnP29788 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VtnP29788 Gm3222-201ENSMUST00000071282 990 ntBASIC12.48□□□□□ -0.41
VtnP29788 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms