Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nckap1P28660 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nckap1P28660 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nckap1P28660 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nckap1P28660 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nckap1P28660 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.71□□□□□ -0.21
Nckap1P28660 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.71□□□□□ -0.21
Nckap1P28660 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.71□□□□□ -0.21
Nckap1P28660 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nckap1P28660 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nckap1P28660 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nckap1P28660 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nckap1P28660 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nckap1P28660 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Nckap1P28660 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nckap1P28660 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nckap1P28660 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nckap1P28660 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.71□□□□□ -0.22
Nckap1P28660 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nckap1P28660 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nckap1P28660 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nckap1P28660 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nckap1P28660 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nckap1P28660 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Nckap1P28660 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nckap1P28660 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Nckap1P28660 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nckap1P28660 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Nckap1P28660 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nckap1P28660 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nckap1P28660 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.7□□□□□ -0.22
Nckap1P28660 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.7□□□□□ -0.22
Nckap1P28660 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.7□□□□□ -0.22
Nckap1P28660 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.7□□□□□ -0.22
Nckap1P28660 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.7□□□□□ -0.22
Nckap1P28660 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.7□□□□□ -0.22
Nckap1P28660 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Nckap1P28660 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Nckap1P28660 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nckap1P28660 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nckap1P28660 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nckap1P28660 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.69□□□□□ -0.22
Nckap1P28660 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nckap1P28660 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Nckap1P28660 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nckap1P28660 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nckap1P28660 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.69□□□□□ -0.22
Nckap1P28660 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Gm12134-201ENSMUST00000122109 520 ntBASIC13.69□□□□□ -0.22
Nckap1P28660 Gm15376-201ENSMUST00000122258 783 ntBASIC13.69□□□□□ -0.22
Nckap1P28660 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
Nckap1P28660 Gm38223-201ENSMUST00000194484 695 ntBASIC13.69□□□□□ -0.22
Nckap1P28660 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.69□□□□□ -0.22
Nckap1P28660 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nckap1P28660 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nckap1P28660 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nckap1P28660 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.69□□□□□ -0.22
Nckap1P28660 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.69□□□□□ -0.22
Nckap1P28660 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms