Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Gm7730-201ENSMUST00000212486 454 ntBASIC12.46□□□□□ -0.41
Cd40P27512 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cd40P27512 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.46□□□□□ -0.41
Cd40P27512 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd40P27512 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd40P27512 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd40P27512 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd40P27512 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd40P27512 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd40P27512 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd40P27512 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.46□□□□□ -0.42
Cd40P27512 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cd40P27512 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.45□□□□□ -0.42
Cd40P27512 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.45□□□□□ -0.42
Cd40P27512 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cd40P27512 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Cd40P27512 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Cd40P27512 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cd40P27512 Gm15770-201ENSMUST00000117498 584 ntBASIC12.45□□□□□ -0.42
Cd40P27512 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.45□□□□□ -0.42
Cd40P27512 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.45□□□□□ -0.42
Cd40P27512 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Cd40P27512 Gm5279-201ENSMUST00000199575 745 ntBASIC12.45□□□□□ -0.42
Cd40P27512 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cd40P27512 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.45□□□□□ -0.42
Cd40P27512 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.45□□□□□ -0.42
Cd40P27512 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cd40P27512 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40P27512 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Cd40P27512 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.44□□□□□ -0.42
Cd40P27512 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.44□□□□□ -0.42
Cd40P27512 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.44□□□□□ -0.42
Cd40P27512 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cd40P27512 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.44□□□□□ -0.42
Cd40P27512 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.44□□□□□ -0.42
Cd40P27512 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.44□□□□□ -0.42
Cd40P27512 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.44□□□□□ -0.42
Cd40P27512 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Gm27437-201ENSMUST00000183429 107 ntBASIC12.44□□□□□ -0.42
Cd40P27512 Mir6977-201ENSMUST00000184960 64 ntBASIC12.44□□□□□ -0.42
Cd40P27512 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Cd40P27512 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.44□□□□□ -0.42
Cd40P27512 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cd40P27512 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cd40P27512 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40P27512 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms