Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cbx3P23198 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cbx3P23198 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Cbx3P23198 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cbx3P23198 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cbx3P23198 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cbx3P23198 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cbx3P23198 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cbx3P23198 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cbx3P23198 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cbx3P23198 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cbx3P23198 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cbx3P23198 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cbx3P23198 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cbx3P23198 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Cbx3P23198 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.53□□□□□ -0.4
Cbx3P23198 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cbx3P23198 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cbx3P23198 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cbx3P23198 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cbx3P23198 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.53□□□□□ -0.4
Cbx3P23198 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cbx3P23198 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cbx3P23198 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cbx3P23198 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cbx3P23198 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.53□□□□□ -0.4
Cbx3P23198 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cbx3P23198 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cbx3P23198 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Cbx3P23198 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cbx3P23198 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cbx3P23198 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cbx3P23198 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cbx3P23198 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cbx3P23198 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cbx3P23198 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cbx3P23198 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cbx3P23198 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cbx3P23198 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.4
Cbx3P23198 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cbx3P23198 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cbx3P23198 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cbx3P23198 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cbx3P23198 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cbx3P23198 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cbx3P23198 Gm8097-201ENSMUST00000117903 829 ntBASIC12.52□□□□□ -0.41
Cbx3P23198 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.52□□□□□ -0.41
Cbx3P23198 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Cbx3P23198 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cbx3P23198 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.52□□□□□ -0.41
Cbx3P23198 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cbx3P23198 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cbx3P23198 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.52□□□□□ -0.41
Cbx3P23198 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cbx3P23198 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cbx3P23198 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cbx3P23198 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cbx3P23198 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cbx3P23198 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cbx3P23198 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cbx3P23198 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cbx3P23198 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cbx3P23198 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cbx3P23198 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cbx3P23198 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cbx3P23198 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.51□□□□□ -0.41
Cbx3P23198 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cbx3P23198 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.51□□□□□ -0.41
Cbx3P23198 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cbx3P23198 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cbx3P23198 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cbx3P23198 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cbx3P23198 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cbx3P23198 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cbx3P23198 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cbx3P23198 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cbx3P23198 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.51□□□□□ -0.41
Cbx3P23198 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cbx3P23198 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms