Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp6P0C0A3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp6P0C0A3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp6P0C0A3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp6P0C0A3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chmp6P0C0A3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp6P0C0A3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.02■□□□□ -0
Chmp6P0C0A3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp6P0C0A3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chmp6P0C0A3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.02■□□□□ -0
Chmp6P0C0A3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp6P0C0A3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp6P0C0A3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp6P0C0A3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.02■□□□□ -0
Chmp6P0C0A3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp6P0C0A3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp6P0C0A3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp6P0C0A3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp6P0C0A3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp6P0C0A3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp6P0C0A3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp6P0C0A3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp6P0C0A3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp6P0C0A3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Chmp6P0C0A3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp6P0C0A3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp6P0C0A3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp6P0C0A3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.02□□□□□ -0.01
Chmp6P0C0A3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp6P0C0A3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp6P0C0A3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.02□□□□□ -0.01
Chmp6P0C0A3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Gm15393-201ENSMUST00000120499 219 ntBASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp6P0C0A3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Chmp6P0C0A3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
Chmp6P0C0A3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp6P0C0A3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp6P0C0A3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp6P0C0A3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15□□□□□ -0.01
Chmp6P0C0A3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp6P0C0A3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp6P0C0A3 Gm44608-201ENSMUST00000206827 855 ntBASIC15□□□□□ -0.01
Chmp6P0C0A3 Gm7390-201ENSMUST00000212452 1216 ntBASIC15□□□□□ -0.01
Chmp6P0C0A3 AC238811.1-201ENSMUST00000225302 441 ntBASIC15□□□□□ -0.01
Chmp6P0C0A3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp6P0C0A3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp6P0C0A3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp6P0C0A3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp6P0C0A3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp6P0C0A3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp6P0C0A3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp6P0C0A3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp6P0C0A3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chmp6P0C0A3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp6P0C0A3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp6P0C0A3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15□□□□□ -0.01
Chmp6P0C0A3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp6P0C0A3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Gm8584-201ENSMUST00000171982 758 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms