Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc9P09633 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC17.73■□□□□ 0.43
Hoxc9P09633 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC17.73■□□□□ 0.43
Hoxc9P09633 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC17.73■□□□□ 0.43
Hoxc9P09633 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.73■□□□□ 0.43
Hoxc9P09633 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Hoxc9P09633 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc9P09633 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc9P09633 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc9P09633 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc9P09633 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc9P09633 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Hoxc9P09633 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc9P09633 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Hoxc9P09633 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC17.73■□□□□ 0.43
Hoxc9P09633 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc9P09633 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc9P09633 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc9P09633 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc9P09633 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc9P09633 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc9P09633 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc9P09633 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc9P09633 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc9P09633 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc9P09633 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc9P09633 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC17.72■□□□□ 0.43
Hoxc9P09633 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc9P09633 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc9P09633 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc9P09633 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc9P09633 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc9P09633 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc9P09633 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Hoxc9P09633 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc9P09633 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC17.72■□□□□ 0.43
Hoxc9P09633 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc9P09633 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc9P09633 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC17.72■□□□□ 0.43
Hoxc9P09633 Gm10327-201ENSMUST00000105222 1002 ntBASIC17.72■□□□□ 0.43
Hoxc9P09633 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc9P09633 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc9P09633 Gm43822-201ENSMUST00000200285 476 ntBASIC17.72■□□□□ 0.43
Hoxc9P09633 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC17.72■□□□□ 0.43
Hoxc9P09633 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc9P09633 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc9P09633 Gm16372-201ENSMUST00000073088 450 ntBASIC17.72■□□□□ 0.43
Hoxc9P09633 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Hoxc9P09633 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc9P09633 Gm12500-202ENSMUST00000186471 2428 ntBASIC17.72■□□□□ 0.43
Hoxc9P09633 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC17.72■□□□□ 0.43
Hoxc9P09633 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc9P09633 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc9P09633 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Hoxc9P09633 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc9P09633 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc9P09633 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC17.72■□□□□ 0.43
Hoxc9P09633 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc9P09633 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc9P09633 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Hoxc9P09633 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc9P09633 Gm38197-201ENSMUST00000192320 2122 ntBASIC17.71■□□□□ 0.43
Hoxc9P09633 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc9P09633 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc9P09633 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc9P09633 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc9P09633 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc9P09633 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Hoxc9P09633 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Hoxc9P09633 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC17.71■□□□□ 0.43
Hoxc9P09633 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
Hoxc9P09633 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC17.71■□□□□ 0.43
Hoxc9P09633 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC17.71■□□□□ 0.43
Hoxc9P09633 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC17.71■□□□□ 0.43
Hoxc9P09633 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Hoxc9P09633 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC17.71■□□□□ 0.43
Hoxc9P09633 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC17.71■□□□□ 0.43
Hoxc9P09633 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC17.71■□□□□ 0.43
Hoxc9P09633 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC17.71■□□□□ 0.43
Hoxc9P09633 Gm7584-201ENSMUST00000175829 940 ntBASIC17.71■□□□□ 0.43
Hoxc9P09633 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc9P09633 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc9P09633 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC17.71■□□□□ 0.43
Hoxc9P09633 Gm44069-201ENSMUST00000204898 506 ntBASIC17.71■□□□□ 0.43
Hoxc9P09633 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC17.71■□□□□ 0.43
Hoxc9P09633 CT009713.10-202ENSMUST00000225734 696 ntBASIC17.71■□□□□ 0.43
Hoxc9P09633 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc9P09633 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc9P09633 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc9P09633 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc9P09633 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Hoxc9P09633 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC17.71■□□□□ 0.43
Hoxc9P09633 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc9P09633 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc9P09633 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc9P09633 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc9P09633 Gm15889-202ENSMUST00000212669 2443 ntBASIC17.71■□□□□ 0.43
Hoxc9P09633 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc9P09633 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc9P09633 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms