Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04224 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.1□□□□□ -0.47
P04224 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.1□□□□□ -0.47
P04224 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.1□□□□□ -0.47
P04224 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
P04224 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04224 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.09□□□□□ -0.47
P04224 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
P04224 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
P04224 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
P04224 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
P04224 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.09□□□□□ -0.47
P04224 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.09□□□□□ -0.47
P04224 Gm2451-201ENSMUST00000199447 999 ntBASIC12.09□□□□□ -0.47
P04224 Gm10290-201ENSMUST00000200451 999 ntBASIC12.09□□□□□ -0.47
P04224 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.09□□□□□ -0.47
P04224 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
P04224 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04224 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
P04224 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
P04224 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
P04224 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
P04224 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
P04224 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04224 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04224 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04224 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04224 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04224 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04224 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04224 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.08□□□□□ -0.48
P04224 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
P04224 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.08□□□□□ -0.48
P04224 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
P04224 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
P04224 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.08□□□□□ -0.48
P04224 Gm13036-201ENSMUST00000117799 748 ntBASIC12.08□□□□□ -0.48
P04224 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04224 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04224 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.08□□□□□ -0.48
P04224 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.08□□□□□ -0.48
P04224 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.08□□□□□ -0.48
P04224 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.08□□□□□ -0.48
P04224 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.08□□□□□ -0.48
P04224 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.08□□□□□ -0.48
P04224 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.08□□□□□ -0.48
P04224 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04224 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04224 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04224 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04224 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04224 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04224 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04224 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04224 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04224 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04224 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04224 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.08□□□□□ -0.48
P04224 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04224 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.08□□□□□ -0.48
P04224 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
P04224 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
P04224 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.07□□□□□ -0.48
P04224 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms