Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.57□□□□□ -0.56
Hoxa3P02831 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Hoxa3P02831 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.57□□□□□ -0.56
Hoxa3P02831 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Gm37917-201ENSMUST00000194711 392 ntBASIC11.57□□□□□ -0.56
Hoxa3P02831 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.57□□□□□ -0.56
Hoxa3P02831 Gm6745-201ENSMUST00000199216 526 ntBASIC11.57□□□□□ -0.56
Hoxa3P02831 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.57□□□□□ -0.56
Hoxa3P02831 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.57□□□□□ -0.56
Hoxa3P02831 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Hoxa3P02831 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Hoxa3P02831 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.57□□□□□ -0.56
Hoxa3P02831 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.56□□□□□ -0.56
Hoxa3P02831 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Hoxa3P02831 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Hoxa3P02831 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.56□□□□□ -0.56
Hoxa3P02831 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa3P02831 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa3P02831 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Hoxa3P02831 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Hoxa3P02831 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa3P02831 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Hoxa3P02831 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa3P02831 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa3P02831 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Hoxa3P02831 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Hoxa3P02831 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.56□□□□□ -0.56
Hoxa3P02831 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.56□□□□□ -0.56
Hoxa3P02831 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa3P02831 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.56□□□□□ -0.56
Hoxa3P02831 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa3P02831 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.56□□□□□ -0.56
Hoxa3P02831 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.56□□□□□ -0.56
Hoxa3P02831 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa3P02831 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa3P02831 Gm15823-201ENSMUST00000064305 670 ntBASIC11.56□□□□□ -0.56
Hoxa3P02831 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa3P02831 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa3P02831 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa3P02831 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa3P02831 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa3P02831 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.56□□□□□ -0.56
Hoxa3P02831 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa3P02831 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.56□□□□□ -0.56
Hoxa3P02831 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa3P02831 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Hoxa3P02831 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa3P02831 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Hoxa3P02831 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Hoxa3P02831 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.55□□□□□ -0.56
Hoxa3P02831 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Hoxa3P02831 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 Gm8515-201ENSMUST00000194852 576 ntBASIC11.55□□□□□ -0.56
Hoxa3P02831 Gm18018-201ENSMUST00000198273 408 ntBASIC11.55□□□□□ -0.56
Hoxa3P02831 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.55□□□□□ -0.56
Hoxa3P02831 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Hoxa3P02831 Gm9908-201ENSMUST00000211534 448 ntBASIC11.55□□□□□ -0.56
Hoxa3P02831 Gm18624-201ENSMUST00000220966 658 ntBASIC11.55□□□□□ -0.56
Hoxa3P02831 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.55□□□□□ -0.56
Hoxa3P02831 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Hoxa3P02831 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Hoxa3P02831 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa3P02831 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.55□□□□□ -0.56
Hoxa3P02831 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms