Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a1P02463 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a1P02463 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC16.61■□□□□ 0.25
Col4a1P02463 Gm13316-201ENSMUST00000140537 691 ntBASIC16.61■□□□□ 0.25
Col4a1P02463 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a1P02463 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a1P02463 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC16.61■□□□□ 0.25
Col4a1P02463 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a1P02463 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Col4a1P02463 AC166051.1-201ENSMUST00000214313 210 ntBASIC16.61■□□□□ 0.25
Col4a1P02463 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a1P02463 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Col4a1P02463 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a1P02463 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a1P02463 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a1P02463 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Col4a1P02463 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a1P02463 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a1P02463 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a1P02463 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a1P02463 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a1P02463 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a1P02463 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a1P02463 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a1P02463 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a1P02463 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a1P02463 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a1P02463 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Col4a1P02463 Gm13297-201ENSMUST00000120205 934 ntBASIC16.6■□□□□ 0.25
Col4a1P02463 Gm11637-201ENSMUST00000120601 592 ntBASIC16.6■□□□□ 0.25
Col4a1P02463 Gm16379-201ENSMUST00000161469 348 ntBASIC16.6■□□□□ 0.25
Col4a1P02463 Gm8762-201ENSMUST00000193486 339 ntBASIC16.6■□□□□ 0.25
Col4a1P02463 Gm42627-201ENSMUST00000197347 224 ntBASIC16.6■□□□□ 0.25
Col4a1P02463 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC16.6■□□□□ 0.25
Col4a1P02463 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a1P02463 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a1P02463 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a1P02463 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a1P02463 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.6■□□□□ 0.25
Col4a1P02463 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a1P02463 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a1P02463 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a1P02463 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a1P02463 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a1P02463 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a1P02463 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a1P02463 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a1P02463 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a1P02463 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.6■□□□□ 0.25
Col4a1P02463 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a1P02463 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
Col4a1P02463 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a1P02463 Gm24255-201ENSMUST00000104481 128 ntBASIC16.59■□□□□ 0.25
Col4a1P02463 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a1P02463 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a1P02463 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a1P02463 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC16.59■□□□□ 0.25
Col4a1P02463 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC16.59■□□□□ 0.25
Col4a1P02463 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC16.59■□□□□ 0.25
Col4a1P02463 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC16.59■□□□□ 0.25
Col4a1P02463 AC122371.3-201ENSMUST00000223402 1061 ntBASIC16.59■□□□□ 0.25
Col4a1P02463 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Col4a1P02463 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC16.59■□□□□ 0.25
Col4a1P02463 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Col4a1P02463 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a1P02463 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a1P02463 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a1P02463 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a1P02463 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Col4a1P02463 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Col4a1P02463 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a1P02463 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a1P02463 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a1P02463 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.59■□□□□ 0.25
Col4a1P02463 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a1P02463 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a1P02463 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a1P02463 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Col4a1P02463 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC16.59■□□□□ 0.25
Col4a1P02463 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a1P02463 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Col4a1P02463 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a1P02463 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a1P02463 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Col4a1P02463 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a1P02463 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col4a1P02463 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Col4a1P02463 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.58■□□□□ 0.25
Col4a1P02463 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Col4a1P02463 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Col4a1P02463 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col4a1P02463 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC16.58■□□□□ 0.24
Col4a1P02463 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a1P02463 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a1P02463 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC16.58■□□□□ 0.24
Col4a1P02463 Gm19163-201ENSMUST00000223313 780 ntBASIC16.58■□□□□ 0.24
Col4a1P02463 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a1P02463 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a1P02463 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Col4a1P02463 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms