Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC10.05□□□□□ -0.8
TcraP01849 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC10.05□□□□□ -0.8
TcraP01849 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC10.05□□□□□ -0.8
TcraP01849 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
TcraP01849 Gm6550-201ENSMUST00000187574 993 ntBASIC10.05□□□□□ -0.8
TcraP01849 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC10.05□□□□□ -0.8
TcraP01849 Gm10459-201ENSMUST00000202708 1155 ntBASIC10.05□□□□□ -0.8
TcraP01849 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC10.05□□□□□ -0.8
TcraP01849 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
TcraP01849 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC10.05□□□□□ -0.8
TcraP01849 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
TcraP01849 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
TcraP01849 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
TcraP01849 Gm10819-201ENSMUST00000099988 561 ntBASIC10.05□□□□□ -0.8
TcraP01849 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
TcraP01849 Tcf21-202ENSMUST00000218002 1788 ntBASIC10.05□□□□□ -0.8
TcraP01849 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
TcraP01849 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
TcraP01849 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
TcraP01849 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.05□□□□□ -0.8
TcraP01849 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
TcraP01849 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.05□□□□□ -0.8
TcraP01849 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
TcraP01849 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
TcraP01849 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
TcraP01849 AC130669.1-201ENSMUST00000228537 1672 ntBASIC10.05□□□□□ -0.8
TcraP01849 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
TcraP01849 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
TcraP01849 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
TcraP01849 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
TcraP01849 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
TcraP01849 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.05□□□□□ -0.8
TcraP01849 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
TcraP01849 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
TcraP01849 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 AC131743.5-201ENSMUST00000220775 1618 ntBASIC10.04□□□□□ -0.8
TcraP01849 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
TcraP01849 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
TcraP01849 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.04□□□□□ -0.8
TcraP01849 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC10.04□□□□□ -0.8
TcraP01849 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
TcraP01849 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.04□□□□□ -0.8
TcraP01849 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Gm11452-201ENSMUST00000122376 690 ntBASIC10.04□□□□□ -0.8
TcraP01849 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC10.04□□□□□ -0.8
TcraP01849 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
TcraP01849 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC10.04□□□□□ -0.8
TcraP01849 Gm28659-201ENSMUST00000188013 759 ntBASIC10.04□□□□□ -0.8
TcraP01849 Gm17971-201ENSMUST00000190239 806 ntBASIC10.04□□□□□ -0.8
TcraP01849 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC10.04□□□□□ -0.8
TcraP01849 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
TcraP01849 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC10.04□□□□□ -0.8
TcraP01849 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC10.04□□□□□ -0.8
TcraP01849 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
TcraP01849 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.04□□□□□ -0.8
TcraP01849 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
TcraP01849 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.04□□□□□ -0.8
TcraP01849 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.04□□□□□ -0.8
TcraP01849 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Nudt18-203ENSMUST00000228768 1578 ntBASIC10.04□□□□□ -0.8
TcraP01849 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
TcraP01849 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms