Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syn1O88935 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syn1O88935 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syn1O88935 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.15□□□□□ -0.14
Syn1O88935 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Syn1O88935 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syn1O88935 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syn1O88935 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syn1O88935 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.15□□□□□ -0.14
Syn1O88935 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Syn1O88935 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syn1O88935 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syn1O88935 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syn1O88935 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syn1O88935 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syn1O88935 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syn1O88935 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Syn1O88935 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syn1O88935 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syn1O88935 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syn1O88935 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Syn1O88935 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syn1O88935 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.14□□□□□ -0.15
Syn1O88935 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syn1O88935 Gm13786-201ENSMUST00000122371 333 ntBASIC14.14□□□□□ -0.15
Syn1O88935 Gm37489-201ENSMUST00000191883 159 ntBASIC14.14□□□□□ -0.15
Syn1O88935 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Syn1O88935 Gm42997-202ENSMUST00000200321 985 ntBASIC14.14□□□□□ -0.15
Syn1O88935 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.14□□□□□ -0.15
Syn1O88935 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syn1O88935 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syn1O88935 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syn1O88935 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Syn1O88935 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.14□□□□□ -0.15
Syn1O88935 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syn1O88935 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Syn1O88935 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syn1O88935 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Syn1O88935 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syn1O88935 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syn1O88935 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syn1O88935 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syn1O88935 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syn1O88935 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Syn1O88935 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.13□□□□□ -0.15
Syn1O88935 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syn1O88935 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Syn1O88935 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Syn1O88935 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syn1O88935 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Syn1O88935 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syn1O88935 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syn1O88935 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Syn1O88935 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.13□□□□□ -0.15
Syn1O88935 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Syn1O88935 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syn1O88935 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.13□□□□□ -0.15
Syn1O88935 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Syn1O88935 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.13□□□□□ -0.15
Syn1O88935 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.13□□□□□ -0.15
Syn1O88935 Gm22334-201ENSMUST00000158070 133 ntBASIC14.13□□□□□ -0.15
Syn1O88935 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.13□□□□□ -0.15
Syn1O88935 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.13□□□□□ -0.15
Syn1O88935 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.13□□□□□ -0.15
Syn1O88935 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syn1O88935 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syn1O88935 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syn1O88935 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syn1O88935 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syn1O88935 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syn1O88935 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Syn1O88935 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Syn1O88935 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Syn1O88935 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syn1O88935 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syn1O88935 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syn1O88935 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syn1O88935 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Syn1O88935 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syn1O88935 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Syn1O88935 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syn1O88935 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.12□□□□□ -0.15
Syn1O88935 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Syn1O88935 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syn1O88935 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.12□□□□□ -0.15
Syn1O88935 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Syn1O88935 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syn1O88935 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.12□□□□□ -0.15
Syn1O88935 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.12□□□□□ -0.15
Syn1O88935 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syn1O88935 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syn1O88935 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Syn1O88935 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syn1O88935 Gm25261-201ENSMUST00000157416 134 ntBASIC14.12□□□□□ -0.15
Syn1O88935 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.12□□□□□ -0.15
Syn1O88935 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.12□□□□□ -0.15
Syn1O88935 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syn1O88935 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syn1O88935 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syn1O88935 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms