Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.16□□□□□ -0.3
Vti1bO88384 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Vti1bO88384 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.16□□□□□ -0.3
Vti1bO88384 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vti1bO88384 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.16□□□□□ -0.3
Vti1bO88384 Gm14701-201ENSMUST00000117156 348 ntBASIC13.16□□□□□ -0.3
Vti1bO88384 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Gm10275-202ENSMUST00000168697 495 ntBASIC13.16□□□□□ -0.3
Vti1bO88384 Gm24158-201ENSMUST00000175263 71 ntBASIC13.16□□□□□ -0.3
Vti1bO88384 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Gm10275-201ENSMUST00000092620 635 ntBASIC13.16□□□□□ -0.3
Vti1bO88384 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Grk6-205ENSMUST00000224653 2976 ntBASIC13.16□□□□□ -0.3
Vti1bO88384 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1bO88384 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1bO88384 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1bO88384 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1bO88384 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1bO88384 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1bO88384 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1bO88384 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Vti1bO88384 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1bO88384 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1bO88384 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.15□□□□□ -0.3
Vti1bO88384 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1bO88384 Gm10253-201ENSMUST00000194270 940 ntBASIC13.15□□□□□ -0.3
Vti1bO88384 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.15□□□□□ -0.3
Vti1bO88384 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.15□□□□□ -0.3
Vti1bO88384 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1bO88384 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1bO88384 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1bO88384 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1bO88384 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1bO88384 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1bO88384 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1bO88384 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1bO88384 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Vti1bO88384 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.15□□□□□ -0.31
Vti1bO88384 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.14□□□□□ -0.31
Vti1bO88384 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Vti1bO88384 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Vti1bO88384 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Vti1bO88384 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Mir449b-201ENSMUST00000104833 80 ntBASIC13.14□□□□□ -0.31
Vti1bO88384 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.14□□□□□ -0.31
Vti1bO88384 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.14□□□□□ -0.31
Vti1bO88384 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.14□□□□□ -0.31
Vti1bO88384 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.14□□□□□ -0.31
Vti1bO88384 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Vti1bO88384 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1bO88384 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms