Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubr1O70481 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubr1O70481 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ubr1O70481 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ubr1O70481 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubr1O70481 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Ubr1O70481 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubr1O70481 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC17.53■□□□□ 0.4
Ubr1O70481 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ubr1O70481 Gm17376-201ENSMUST00000166016 84 ntBASIC17.53■□□□□ 0.4
Ubr1O70481 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubr1O70481 Gm38297-201ENSMUST00000195122 1057 ntBASIC17.53■□□□□ 0.4
Ubr1O70481 AC069562.3-201ENSMUST00000225387 587 ntBASIC17.53■□□□□ 0.4
Ubr1O70481 Gm44207-201ENSMUST00000204568 1424 ntBASIC17.53■□□□□ 0.4
Ubr1O70481 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ubr1O70481 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubr1O70481 Gm43273-201ENSMUST00000199649 2594 ntBASIC17.52■□□□□ 0.4
Ubr1O70481 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubr1O70481 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubr1O70481 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.52■□□□□ 0.4
Ubr1O70481 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ubr1O70481 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Ubr1O70481 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubr1O70481 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubr1O70481 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubr1O70481 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ubr1O70481 Gm8805-201ENSMUST00000117848 313 ntBASIC17.52■□□□□ 0.4
Ubr1O70481 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Ubr1O70481 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC17.52■□□□□ 0.4
Ubr1O70481 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ubr1O70481 Gm44772-201ENSMUST00000207623 1191 ntBASIC17.52■□□□□ 0.4
Ubr1O70481 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC17.52■□□□□ 0.4
Ubr1O70481 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ubr1O70481 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ubr1O70481 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubr1O70481 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubr1O70481 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubr1O70481 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ubr1O70481 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ubr1O70481 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ubr1O70481 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubr1O70481 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubr1O70481 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubr1O70481 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubr1O70481 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubr1O70481 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC17.51■□□□□ 0.39
Ubr1O70481 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ubr1O70481 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC17.51■□□□□ 0.39
Ubr1O70481 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC17.51■□□□□ 0.39
Ubr1O70481 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ubr1O70481 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC17.51■□□□□ 0.39
Ubr1O70481 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ubr1O70481 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ubr1O70481 Gm6458-201ENSMUST00000211573 635 ntBASIC17.51■□□□□ 0.39
Ubr1O70481 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ubr1O70481 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubr1O70481 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubr1O70481 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubr1O70481 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubr1O70481 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubr1O70481 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubr1O70481 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ubr1O70481 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubr1O70481 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ubr1O70481 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubr1O70481 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC17.51■□□□□ 0.39
Ubr1O70481 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubr1O70481 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC17.51■□□□□ 0.39
Ubr1O70481 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ubr1O70481 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ubr1O70481 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC17.51■□□□□ 0.39
Ubr1O70481 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubr1O70481 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubr1O70481 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC17.5■□□□□ 0.39
Ubr1O70481 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ubr1O70481 Gm37133-201ENSMUST00000192705 1922 ntBASIC17.5■□□□□ 0.39
Ubr1O70481 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ubr1O70481 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC17.5■□□□□ 0.39
Ubr1O70481 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubr1O70481 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubr1O70481 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubr1O70481 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubr1O70481 Gm25214-201ENSMUST00000104573 129 ntBASIC17.5■□□□□ 0.39
Ubr1O70481 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ubr1O70481 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubr1O70481 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC17.5■□□□□ 0.39
Ubr1O70481 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubr1O70481 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC17.5■□□□□ 0.39
Ubr1O70481 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ubr1O70481 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubr1O70481 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubr1O70481 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ubr1O70481 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubr1O70481 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubr1O70481 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ubr1O70481 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ubr1O70481 Gm14704-201ENSMUST00000120300 874 ntBASIC17.49■□□□□ 0.39
Ubr1O70481 Gm12539-201ENSMUST00000121549 1098 ntBASIC17.49■□□□□ 0.39
Ubr1O70481 Gm29199-201ENSMUST00000187766 775 ntBASIC17.49■□□□□ 0.39
Ubr1O70481 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms