Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Ldb2O55203 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.69□□□□□ -0.22
Ldb2O55203 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ldb2O55203 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.69□□□□□ -0.22
Ldb2O55203 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.69□□□□□ -0.22
Ldb2O55203 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Gm15321-201ENSMUST00000121290 288 ntBASIC13.69□□□□□ -0.22
Ldb2O55203 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.69□□□□□ -0.22
Ldb2O55203 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Gm24694-201ENSMUST00000180054 110 ntBASIC13.69□□□□□ -0.22
Ldb2O55203 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Gm27663-201ENSMUST00000184839 110 ntBASIC13.69□□□□□ -0.22
Ldb2O55203 Gm18905-201ENSMUST00000205454 928 ntBASIC13.69□□□□□ -0.22
Ldb2O55203 Gm20445-201ENSMUST00000061905 565 ntBASIC13.69□□□□□ -0.22
Ldb2O55203 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.69□□□□□ -0.22
Ldb2O55203 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Ldb2O55203 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ldb2O55203 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.69□□□□□ -0.22
Ldb2O55203 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Ldb2O55203 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ldb2O55203 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ldb2O55203 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.68□□□□□ -0.22
Ldb2O55203 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.68□□□□□ -0.22
Ldb2O55203 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ldb2O55203 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.68□□□□□ -0.22
Ldb2O55203 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.68□□□□□ -0.22
Ldb2O55203 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.68□□□□□ -0.22
Ldb2O55203 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.68□□□□□ -0.22
Ldb2O55203 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.68□□□□□ -0.22
Ldb2O55203 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.68□□□□□ -0.22
Ldb2O55203 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.68□□□□□ -0.22
Ldb2O55203 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ldb2O55203 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb2O55203 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ldb2O55203 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Ldb2O55203 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.67□□□□□ -0.22
Ldb2O55203 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb2O55203 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb2O55203 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb2O55203 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb2O55203 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.67□□□□□ -0.22
Ldb2O55203 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb2O55203 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb2O55203 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb2O55203 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ldb2O55203 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb2O55203 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb2O55203 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ldb2O55203 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ldb2O55203 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb2O55203 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms