Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Pde6dO55057 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 AC123645.1-201ENSMUST00000228469 605 ntBASIC10.86□□□□□ -0.67
Pde6dO55057 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Pde6dO55057 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Pde6dO55057 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.86□□□□□ -0.67
Pde6dO55057 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pde6dO55057 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.85□□□□□ -0.67
Pde6dO55057 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.85□□□□□ -0.67
Pde6dO55057 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Pde6dO55057 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.85□□□□□ -0.67
Pde6dO55057 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Pde6dO55057 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pde6dO55057 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC10.85□□□□□ -0.67
Pde6dO55057 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC10.85□□□□□ -0.67
Pde6dO55057 Gm12644-201ENSMUST00000119935 606 ntBASIC10.85□□□□□ -0.67
Pde6dO55057 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC10.85□□□□□ -0.67
Pde6dO55057 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 AC124569.2-201ENSMUST00000225998 818 ntBASIC10.85□□□□□ -0.67
Pde6dO55057 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Pde6dO55057 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Pde6dO55057 Spr-ps1-201ENSMUST00000089584 605 ntBASIC10.85□□□□□ -0.67
Pde6dO55057 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Pde6dO55057 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.85□□□□□ -0.67
Pde6dO55057 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Pde6dO55057 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pde6dO55057 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Pde6dO55057 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Pde6dO55057 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pde6dO55057 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Pde6dO55057 Gm5366-201ENSMUST00000215494 1338 ntBASIC10.84□□□□□ -0.67
Pde6dO55057 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC10.84□□□□□ -0.67
Pde6dO55057 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Pde6dO55057 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Pde6dO55057 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Pde6dO55057 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC10.84□□□□□ -0.67
Pde6dO55057 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC10.84□□□□□ -0.67
Pde6dO55057 Gm12882-201ENSMUST00000121696 517 ntBASIC10.84□□□□□ -0.67
Pde6dO55057 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC10.84□□□□□ -0.67
Pde6dO55057 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms