Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.81□□□□□ -0.36
BckdkO55028 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.81□□□□□ -0.36
BckdkO55028 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
BckdkO55028 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BckdkO55028 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BckdkO55028 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.8□□□□□ -0.36
BckdkO55028 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BckdkO55028 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
BckdkO55028 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BckdkO55028 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.8□□□□□ -0.36
BckdkO55028 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BckdkO55028 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
BckdkO55028 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
BckdkO55028 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
BckdkO55028 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BckdkO55028 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BckdkO55028 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BckdkO55028 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BckdkO55028 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.8□□□□□ -0.36
BckdkO55028 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
BckdkO55028 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
BckdkO55028 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.8□□□□□ -0.36
BckdkO55028 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
BckdkO55028 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BckdkO55028 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BckdkO55028 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BckdkO55028 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
BckdkO55028 Gm5745-201ENSMUST00000183748 313 ntBASIC12.8□□□□□ -0.36
BckdkO55028 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.8□□□□□ -0.36
BckdkO55028 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.8□□□□□ -0.36
BckdkO55028 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.8□□□□□ -0.36
BckdkO55028 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.8□□□□□ -0.36
BckdkO55028 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BckdkO55028 Mir125a-201ENSMUST00000083545 68 ntBASIC12.8□□□□□ -0.36
BckdkO55028 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
BckdkO55028 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
BckdkO55028 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
BckdkO55028 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BckdkO55028 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.8□□□□□ -0.36
BckdkO55028 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
BckdkO55028 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BckdkO55028 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BckdkO55028 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
BckdkO55028 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
BckdkO55028 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BckdkO55028 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
BckdkO55028 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.8□□□□□ -0.36
BckdkO55028 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
BckdkO55028 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.79□□□□□ -0.36
BckdkO55028 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Gm4875-201ENSMUST00000118257 786 ntBASIC12.79□□□□□ -0.36
BckdkO55028 Gm15321-201ENSMUST00000121290 288 ntBASIC12.79□□□□□ -0.36
BckdkO55028 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.79□□□□□ -0.36
BckdkO55028 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Gm20445-201ENSMUST00000061905 565 ntBASIC12.79□□□□□ -0.36
BckdkO55028 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
BckdkO55028 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.79□□□□□ -0.36
BckdkO55028 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
BckdkO55028 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.79□□□□□ -0.36
BckdkO55028 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BckdkO55028 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
BckdkO55028 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms