Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Itgb3O54890 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Itgb3O54890 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.59□□□□□ -0.07
Itgb3O54890 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Itgb3O54890 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Itgb3O54890 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Itgb3O54890 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
Itgb3O54890 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Itgb3O54890 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Itgb3O54890 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Itgb3O54890 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Itgb3O54890 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Itgb3O54890 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Itgb3O54890 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.58□□□□□ -0.08
Itgb3O54890 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Itgb3O54890 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Itgb3O54890 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.58□□□□□ -0.08
Itgb3O54890 Gm27701-201ENSMUST00000184498 110 ntBASIC14.58□□□□□ -0.08
Itgb3O54890 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.58□□□□□ -0.08
Itgb3O54890 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.58□□□□□ -0.08
Itgb3O54890 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.58□□□□□ -0.08
Itgb3O54890 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Itgb3O54890 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Itgb3O54890 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Itgb3O54890 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.58□□□□□ -0.08
Itgb3O54890 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Itgb3O54890 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.58□□□□□ -0.08
Itgb3O54890 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Itgb3O54890 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Itgb3O54890 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Itgb3O54890 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Itgb3O54890 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Itgb3O54890 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
Itgb3O54890 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Itgb3O54890 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Itgb3O54890 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Itgb3O54890 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Itgb3O54890 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Itgb3O54890 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Itgb3O54890 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.58□□□□□ -0.08
Itgb3O54890 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Itgb3O54890 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Itgb3O54890 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Itgb3O54890 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Itgb3O54890 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Itgb3O54890 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Itgb3O54890 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
Itgb3O54890 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Itgb3O54890 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Itgb3O54890 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Itgb3O54890 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Itgb3O54890 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.57□□□□□ -0.08
Itgb3O54890 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Itgb3O54890 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Itgb3O54890 Gm28911-201ENSMUST00000188837 117 ntBASIC14.57□□□□□ -0.08
Itgb3O54890 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.57□□□□□ -0.08
Itgb3O54890 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Itgb3O54890 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.57□□□□□ -0.08
Itgb3O54890 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Itgb3O54890 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Itgb3O54890 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Itgb3O54890 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Itgb3O54890 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Itgb3O54890 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Itgb3O54890 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Itgb3O54890 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Itgb3O54890 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
Itgb3O54890 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Itgb3O54890 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Itgb3O54890 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Itgb3O54890 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Itgb3O54890 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Itgb3O54890 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Itgb3O54890 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Itgb3O54890 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Itgb3O54890 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Itgb3O54890 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Itgb3O54890 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Itgb3O54890 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.56□□□□□ -0.08
Itgb3O54890 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Itgb3O54890 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Itgb3O54890 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Itgb3O54890 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Itgb3O54890 Gm5186-201ENSMUST00000218781 920 ntBASIC14.56□□□□□ -0.08
Itgb3O54890 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Itgb3O54890 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Itgb3O54890 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Itgb3O54890 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Itgb3O54890 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Itgb3O54890 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Itgb3O54890 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Itgb3O54890 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Itgb3O54890 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.56□□□□□ -0.08
Itgb3O54890 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Itgb3O54890 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.56□□□□□ -0.08
Itgb3O54890 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Itgb3O54890 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Itgb3O54890 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Itgb3O54890 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.56□□□□□ -0.08
Itgb3O54890 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms