Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DffaO54786 Gm14767-201ENSMUST00000121559 586 ntBASIC14.44□□□□□ -0.1
DffaO54786 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.44□□□□□ -0.1
DffaO54786 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DffaO54786 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.44□□□□□ -0.1
DffaO54786 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
DffaO54786 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffaO54786 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffaO54786 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffaO54786 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffaO54786 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffaO54786 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffaO54786 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffaO54786 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
DffaO54786 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffaO54786 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DffaO54786 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
DffaO54786 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
DffaO54786 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.43□□□□□ -0.1
DffaO54786 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
DffaO54786 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.43□□□□□ -0.1
DffaO54786 Gm43703-201ENSMUST00000200523 763 ntBASIC14.43□□□□□ -0.1
DffaO54786 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
DffaO54786 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
DffaO54786 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
DffaO54786 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.43□□□□□ -0.1
DffaO54786 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.43□□□□□ -0.1
DffaO54786 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffaO54786 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffaO54786 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
DffaO54786 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffaO54786 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffaO54786 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DffaO54786 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffaO54786 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffaO54786 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffaO54786 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
DffaO54786 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffaO54786 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffaO54786 Gm13453-201ENSMUST00000118708 357 ntBASIC14.42□□□□□ -0.1
DffaO54786 Gm15393-201ENSMUST00000120499 219 ntBASIC14.42□□□□□ -0.1
DffaO54786 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.42□□□□□ -0.1
DffaO54786 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DffaO54786 Mir6956-201ENSMUST00000183598 62 ntBASIC14.42□□□□□ -0.1
DffaO54786 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.42□□□□□ -0.1
DffaO54786 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DffaO54786 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.42□□□□□ -0.1
DffaO54786 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
DffaO54786 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffaO54786 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.42□□□□□ -0.1
DffaO54786 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffaO54786 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffaO54786 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DffaO54786 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
DffaO54786 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.42□□□□□ -0.1
DffaO54786 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffaO54786 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffaO54786 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.41□□□□□ -0.1
DffaO54786 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffaO54786 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffaO54786 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffaO54786 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
DffaO54786 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffaO54786 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
DffaO54786 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
DffaO54786 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DffaO54786 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DffaO54786 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffaO54786 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
DffaO54786 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
DffaO54786 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.41□□□□□ -0.1
DffaO54786 Gm27680-201ENSMUST00000184192 160 ntBASIC14.41□□□□□ -0.1
DffaO54786 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
DffaO54786 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.41□□□□□ -0.1
DffaO54786 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffaO54786 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms