Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc4O35988 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc4O35988 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc4O35988 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc4O35988 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc4O35988 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sdc4O35988 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc4O35988 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc4O35988 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc4O35988 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Sdc4O35988 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sdc4O35988 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sdc4O35988 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sdc4O35988 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Sdc4O35988 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.17□□□□□ -0.14
Sdc4O35988 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sdc4O35988 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sdc4O35988 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sdc4O35988 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sdc4O35988 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sdc4O35988 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sdc4O35988 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sdc4O35988 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.17□□□□□ -0.14
Sdc4O35988 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sdc4O35988 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sdc4O35988 Gm15371-201ENSMUST00000117057 784 ntBASIC14.17□□□□□ -0.14
Sdc4O35988 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.17□□□□□ -0.14
Sdc4O35988 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.17□□□□□ -0.14
Sdc4O35988 Gm15429-201ENSMUST00000151268 798 ntBASIC14.17□□□□□ -0.14
Sdc4O35988 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.17□□□□□ -0.14
Sdc4O35988 Gm2445-201ENSMUST00000182798 989 ntBASIC14.17□□□□□ -0.14
Sdc4O35988 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sdc4O35988 Gm17794-201ENSMUST00000220252 955 ntBASIC14.17□□□□□ -0.14
Sdc4O35988 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sdc4O35988 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sdc4O35988 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sdc4O35988 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sdc4O35988 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.17□□□□□ -0.14
Sdc4O35988 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sdc4O35988 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sdc4O35988 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sdc4O35988 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sdc4O35988 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sdc4O35988 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.17□□□□□ -0.14
Sdc4O35988 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sdc4O35988 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sdc4O35988 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Sdc4O35988 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sdc4O35988 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sdc4O35988 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sdc4O35988 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sdc4O35988 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sdc4O35988 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sdc4O35988 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sdc4O35988 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sdc4O35988 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sdc4O35988 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.16□□□□□ -0.14
Sdc4O35988 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.16□□□□□ -0.14
Sdc4O35988 Gm27892-201ENSMUST00000185017 106 ntBASIC14.16□□□□□ -0.14
Sdc4O35988 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.16□□□□□ -0.14
Sdc4O35988 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sdc4O35988 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sdc4O35988 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.16□□□□□ -0.14
Sdc4O35988 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sdc4O35988 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.16□□□□□ -0.14
Sdc4O35988 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sdc4O35988 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sdc4O35988 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sdc4O35988 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sdc4O35988 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sdc4O35988 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.16□□□□□ -0.14
Sdc4O35988 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sdc4O35988 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sdc4O35988 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sdc4O35988 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.16□□□□□ -0.14
Sdc4O35988 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Sdc4O35988 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.15□□□□□ -0.14
Sdc4O35988 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.15□□□□□ -0.14
Sdc4O35988 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.15□□□□□ -0.14
Sdc4O35988 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Sdc4O35988 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms