Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.47□□□□□ -0.25
Npc1O35604 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Npc1O35604 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.47□□□□□ -0.25
Npc1O35604 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Npc1O35604 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Npc1O35604 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Npc1O35604 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.46□□□□□ -0.25
Npc1O35604 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Npc1O35604 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Npc1O35604 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Npc1O35604 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Npc1O35604 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Npc1O35604 Gm6912-201ENSMUST00000117218 544 ntBASIC13.46□□□□□ -0.25
Npc1O35604 Gm12859-201ENSMUST00000117834 427 ntBASIC13.46□□□□□ -0.25
Npc1O35604 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Npc1O35604 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.46□□□□□ -0.25
Npc1O35604 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.46□□□□□ -0.25
Npc1O35604 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Npc1O35604 Gm8584-201ENSMUST00000171982 758 ntBASIC13.46□□□□□ -0.25
Npc1O35604 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.46□□□□□ -0.25
Npc1O35604 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.46□□□□□ -0.25
Npc1O35604 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Npc1O35604 Gm6218-201ENSMUST00000219812 628 ntBASIC13.46□□□□□ -0.25
Npc1O35604 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Npc1O35604 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Npc1O35604 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Npc1O35604 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.46□□□□□ -0.26
Npc1O35604 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Npc1O35604 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.26
Npc1O35604 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.45□□□□□ -0.26
Npc1O35604 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Npc1O35604 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Npc1O35604 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Npc1O35604 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.45□□□□□ -0.26
Npc1O35604 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.45□□□□□ -0.26
Npc1O35604 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.45□□□□□ -0.26
Npc1O35604 Gm42612-201ENSMUST00000197986 623 ntBASIC13.45□□□□□ -0.26
Npc1O35604 Gm43170-201ENSMUST00000199827 612 ntBASIC13.45□□□□□ -0.26
Npc1O35604 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Npc1O35604 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.45□□□□□ -0.26
Npc1O35604 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Npc1O35604 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Npc1O35604 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Npc1O35604 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Npc1O35604 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Npc1O35604 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Npc1O35604 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Npc1O35604 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Npc1O35604 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Npc1O35604 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Npc1O35604 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Npc1O35604 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Npc1O35604 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Npc1O35604 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.44□□□□□ -0.26
Npc1O35604 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Npc1O35604 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.44□□□□□ -0.26
Npc1O35604 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.44□□□□□ -0.26
Npc1O35604 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Npc1O35604 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.44□□□□□ -0.26
Npc1O35604 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Npc1O35604 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.44□□□□□ -0.26
Npc1O35604 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Npc1O35604 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.44□□□□□ -0.26
Npc1O35604 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Npc1O35604 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.44□□□□□ -0.26
Npc1O35604 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.44□□□□□ -0.26
Npc1O35604 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.44□□□□□ -0.26
Npc1O35604 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Npc1O35604 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Npc1O35604 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Npc1O35604 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Npc1O35604 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Npc1O35604 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms