Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Polr1aO35134 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Polr1aO35134 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Polr1aO35134 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Polr1aO35134 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Polr1aO35134 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Polr1aO35134 Gm24830-201ENSMUST00000102024 166 ntBASIC20.77■□□□□ 0.92
Polr1aO35134 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC20.77■□□□□ 0.92
Polr1aO35134 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Polr1aO35134 Gm25890-201ENSMUST00000177643 165 ntBASIC20.77■□□□□ 0.92
Polr1aO35134 Rnu1b2-201ENSMUST00000178073 165 ntBASIC20.77■□□□□ 0.92
Polr1aO35134 Rnu1b1-201ENSMUST00000178250 165 ntBASIC20.77■□□□□ 0.92
Polr1aO35134 Gm22614-201ENSMUST00000178300 165 ntBASIC20.77■□□□□ 0.92
Polr1aO35134 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC20.77■□□□□ 0.92
Polr1aO35134 AC155637.1-201ENSMUST00000218560 636 ntBASIC20.77■□□□□ 0.92
Polr1aO35134 Gm22042-201ENSMUST00000082989 165 ntBASIC20.77■□□□□ 0.92
Polr1aO35134 Gm26232-201ENSMUST00000083360 166 ntBASIC20.77■□□□□ 0.92
Polr1aO35134 Gm24136-201ENSMUST00000083374 165 ntBASIC20.77■□□□□ 0.92
Polr1aO35134 Rnu1b6-201ENSMUST00000083839 166 ntBASIC20.77■□□□□ 0.92
Polr1aO35134 Gm26110-201ENSMUST00000083971 165 ntBASIC20.77■□□□□ 0.92
Polr1aO35134 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Polr1aO35134 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Polr1aO35134 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Polr1aO35134 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC20.77■□□□□ 0.91
Polr1aO35134 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC20.77■□□□□ 0.91
Polr1aO35134 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Polr1aO35134 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Polr1aO35134 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Polr1aO35134 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Polr1aO35134 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Polr1aO35134 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Polr1aO35134 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Polr1aO35134 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Polr1aO35134 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC20.76■□□□□ 0.91
Polr1aO35134 Gm3786-201ENSMUST00000202659 378 ntBASIC20.76■□□□□ 0.91
Polr1aO35134 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Polr1aO35134 AC135669.1-202ENSMUST00000216742 540 ntBASIC20.76■□□□□ 0.91
Polr1aO35134 Gm9004-201ENSMUST00000218739 1222 ntBASIC20.76■□□□□ 0.91
Polr1aO35134 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Polr1aO35134 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Polr1aO35134 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Polr1aO35134 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Polr1aO35134 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Polr1aO35134 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Polr1aO35134 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Polr1aO35134 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Polr1aO35134 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Polr1aO35134 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Polr1aO35134 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.76■□□□□ 0.91
Polr1aO35134 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC20.75■□□□□ 0.91
Polr1aO35134 Gm8738-201ENSMUST00000172606 329 ntBASIC20.75■□□□□ 0.91
Polr1aO35134 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Polr1aO35134 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Polr1aO35134 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Polr1aO35134 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Polr1aO35134 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC20.75■□□□□ 0.91
Polr1aO35134 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Polr1aO35134 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC20.75■□□□□ 0.91
Polr1aO35134 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC20.75■□□□□ 0.91
Polr1aO35134 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Polr1aO35134 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC20.75■□□□□ 0.91
Polr1aO35134 Rps4l-202ENSMUST00000204242 789 ntBASIC20.75■□□□□ 0.91
Polr1aO35134 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Polr1aO35134 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Polr1aO35134 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Tmed9-203ENSMUST00000224741 1450 ntBASIC20.75■□□□□ 0.91
Polr1aO35134 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr1aO35134 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC20.75■□□□□ 0.91
Polr1aO35134 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Polr1aO35134 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Polr1aO35134 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Polr1aO35134 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Polr1aO35134 CT010478.1-201ENSMUST00000220747 2787 ntBASIC20.74■□□□□ 0.91
Polr1aO35134 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Polr1aO35134 Gm37297-201ENSMUST00000192974 2384 ntBASIC20.74■□□□□ 0.91
Polr1aO35134 Gm14704-201ENSMUST00000120300 874 ntBASIC20.74■□□□□ 0.91
Polr1aO35134 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms